In an adult with intra‑hepatic cholangiocarcinoma harboring an FGFR2 fusion who has progressed after first‑line gemcitabine plus cisplatin, what is the recommended next‑line therapy?

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Last updated: February 25, 2026View editorial policy

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FGFR Inhibitors Are the Recommended Next-Line Therapy

For an adult with intrahepatic cholangiocarcinoma harboring an FGFR2 fusion who has progressed after first-line gemcitabine plus cisplatin, FGFR inhibitors (pemigatinib, futibatinib, or infigratinib) should be initiated immediately as second-line therapy. This represents a strong recommendation with Level 2 evidence from multiple international guidelines. 1

Specific FGFR Inhibitor Options

The following three agents have demonstrated meaningful clinical activity and are FDA/EMA approved for this indication:

Futibatinib (First Choice Based on Efficacy Data)

  • Highest objective response rate at 41.7% with median progression-free survival of 9.0 months and overall survival of 21.7 months in the FOENIX-CCA2 trial 1, 2
  • Covalent, non-ATP-competitive FGFR1-4 inhibitor with activity against acquired resistance mutations that emerge with ATP-competitive inhibitors 2
  • FDA-approved for previously treated, unresectable, locally advanced or metastatic intrahepatic cholangiocarcinoma with FGFR2 fusions or rearrangements 3
  • Dosed at 20 mg orally once daily continuously 3, 2
  • Common grade 3+ adverse events: hyperphosphatemia (30%), elevated AST (7%), stomatitis (6%), fatigue (6%) 2

Pemigatinib

  • Objective response rate of 35.5% with median PFS 6.9-9.0 months and OS 12.2-21.7 months 1
  • ATP-competitive FGFR1-3 inhibitor 1
  • Grade 2+ recommendation with strong agreement from French guidelines 1

Infigratinib

  • Objective response rate of 23.1% with similar PFS/OS ranges 1
  • ATP-competitive inhibitor 1
  • Grade 2+ recommendation with strong agreement 1

Critical Evidence Supporting This Recommendation

The EASL-ILCA 2023 guidelines provide a strong recommendation (Level 2 evidence, strong consensus) that FGFR inhibitors should be used for patients with FGFR2 fusions or rearrangements after progression on standard first-line chemotherapy. 1 This recommendation is echoed by the 2024 French Association for the Study of the Liver guidelines with Grade 2+ strength and strong agreement. 1

All three pivotal trials were large, multicenter phase II studies in patients with advanced cholangiocarcinoma harboring FGFR2 fusions/rearrangements who had progressed on at least one prior line of standard chemotherapy. 1 Subanalyses consistently showed that response rates and survival outcomes were highest in patients with only one or two prior lines of therapy, making immediate use after first-line failure optimal. 1

Why FGFR Inhibitors Over Chemotherapy

While no head-to-head randomized trials compare FGFR inhibitors directly to second-line chemotherapy in FGFR2-fusion positive disease, the clinical outcomes with FGFR inhibition are substantially superior to historical second-line chemotherapy data in unselected cholangiocarcinoma populations. 1

For context, FOLFOX chemotherapy (the standard second-line option for patients without actionable mutations) achieves more modest outcomes in unselected populations. 1 The consistent 23-42% objective response rates and 9-22 month overall survival with FGFR inhibitors represent a meaningful therapeutic advance. 1

Important Caveats and Pitfalls

Confirm FGFR2 Fusion/Rearrangement Specifically

  • FGFR inhibitors show no meaningful benefit in patients with other FGFR2 alterations (mutations, amplifications) 1
  • In the pemigatinib trial, patients with FGFR2 mutations had median PFS of only 2.1 months and OS of 6.7 months, with zero objective responses 1
  • Use NGS-based RNA panel to detect fusion transcripts reliably 1

Hyperphosphatemia Management

  • Occurs in 72% of patients (16-30% grade 3+) across all FGFR inhibitor trials 4, 2
  • Requires phosphate-restricted diet and phosphate binders 5
  • May necessitate dose reduction but rarely requires permanent discontinuation 5, 2

Resistance Mechanisms

  • Acquired gatekeeper mutations can emerge under selective pressure of FGFR inhibitors 6
  • Futibatinib's covalent binding mechanism may overcome some ATP-competitive inhibitor resistance 2
  • Liquid biopsy (circulating tumor DNA) can detect evolving resistance patterns noninvasively 6

Performance Status Matters

  • These recommendations apply to patients with good performance status (ECOG 0-1) 1
  • For ECOG 2 patients, consider fluoropyrimidine monotherapy instead 1
  • For ECOG 3-4 patients, supportive care only is recommended 1

Alternative Second-Line Options (If FGFR Inhibitors Unavailable)

If FGFR inhibitors are not accessible, the treatment algorithm should prioritize:

  1. FOLFOX chemotherapy (Grade 1+ recommendation, strong agreement) 1
  2. Clinical trial enrollment is strongly encouraged for all patients with advanced cholangiocarcinoma 7

Molecular Testing Timing

Comprehensive molecular profiling should be performed at first-line treatment initiation, not delayed until progression, to enable rapid transition to targeted therapy. 1 Testing should include NGS-based RNA panel for FGFR2 fusions, plus evaluation for IDH1 mutations, BRAF V600E, HER2 amplification, NTRK fusions, and MSI/dMMR status. 1, 8

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Futibatinib for FGFR2-Rearranged Intrahepatic Cholangiocarcinoma.

The New England journal of medicine, 2023

Research

Phase II Study of BGJ398 in Patients With FGFR-Altered Advanced Cholangiocarcinoma.

Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 2018

Guideline

Treatment of HER2-Negative Stage 4 Cholangiocarcinoma

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

First‑Line Immunotherapy Combined with Chemotherapy for Advanced Cholangiocarcinoma

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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