What is the purpose of a stool routine examination in the diagnosis of diarrhoea disease?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: February 22, 2025View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

From the Guidelines

The primary purpose of a stool routine examination in the diagnosis of diarrheal disease is to identify the underlying cause of the illness, such as bacterial, viral, or parasitic infections, and guide treatment decisions. According to the 2017 Infectious Diseases Society of America clinical practice guidelines for the diagnosis and management of infectious diarrhea 1, stool testing should be performed for various pathogens, including Salmonella, Shigella, Campylobacter, Yersinia, C. difficile, and STEC, in people with diarrhea accompanied by fever, bloody or mucoid stools, severe abdominal cramping or tenderness, or signs of sepsis.

The stool routine examination should include:

  • Macroscopic examination: Observe color, consistency, presence of blood or mucus
  • Microscopic examination: Look for white blood cells, red blood cells, ova, and parasites
  • Fecal occult blood test: To detect hidden blood
  • Culture and sensitivity: If bacterial infection is suspected, as recommended by the guidelines 1
  • Testing for specific pathogens, such as Vibrio species, in people with exposure to salty or brackish waters, consumption of raw or undercooked shellfish, or travel to cholera-endemic regions within 3 days prior to onset of diarrhea 1

This examination helps identify the cause of diarrhea and guides treatment, with the presence of white blood cells suggesting inflammatory or invasive pathogens, ova and parasites indicating parasitic infection, and positive culture helping identify specific bacterial pathogens and their antibiotic sensitivities 1. It is essential to perform this examination on a fresh stool sample, ideally within 30 minutes of collection, and use proper protective equipment when handling stool samples to prevent infection. Prompt analysis and reporting are crucial for timely patient management.

In specific cases, such as immunocompromised individuals or possible outbreaks of diarrheal illness, a broader set of bacterial, viral, and parasitic agents should be considered, and selection of agents for testing should be based on a combination of host and epidemiologic risk factors, ideally in coordination with public health authorities 1.

From the Research

Purpose of Stool Routine Examination

The purpose of a stool routine examination in the diagnosis of diarrhoea disease is to:

  • Identify the presence of blood, mucus, and parasites in the stool 2
  • Determine the pH of the stool and examine for red and white blood cells, parasites, and stool fat 2
  • Help distinguish between patients infected with different pathogens, such as Shigella and Entamoeba histolytica 2
  • Detect parasites or their ova, and identify the type of parasite present, such as Giardia lamblia or Entamoeba histolytica 3

Diagnostic Value

Stool examination is most useful in:

  • Establishing a diagnosis of dysentery 2
  • Distinguishing between patients infected with Shigella and Entamoeba histolytica 2
  • Identifying parasitic causes of diarrhoea, such as Giardia lamblia and Entamoeba histolytica 3
  • Characterizing chronic diarrhoea as osmotic or secretory 4

Limitations

Stool examination has limited usefulness in:

  • Discriminating between pathogens causing watery diarrhoea 2
  • Diagnosing chronic diarrhoea, where other tests such as blood and faecal screening, colonoscopy, and dietetic assessment may be necessary 5

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Value of stool examination in patients with diarrhoea.

British medical journal (Clinical research ed.), 1983

Research

Importance of microscopic stool examination in patients with diarrhoea.

Journal of Ayub Medical College, Abbottabad : JAMC, 2014

Research

Clinical approach to diarrhea.

Internal and emergency medicine, 2012

Research

A practical approach to the patient with chronic diarrhoea.

Clinical medicine (London, England), 2021

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.