What are the common causes and workup for amenorrhea?

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Common Causes and Workup of Amenorrhea

Amenorrhea should be evaluated systematically based on classification (primary vs secondary) and underlying pathophysiology, with a structured diagnostic approach that identifies the most common causes including PCOS, functional hypothalamic amenorrhea, hyperprolactinemia, and primary ovarian insufficiency. 1

Classification and Definitions

  • Primary amenorrhea: Absence of menarche by age 16 years, or within 3 years of thelarche 1, 2
  • Secondary amenorrhea: Cessation of previously regular menses for 3+ months or irregular menses for 6+ months 1, 2

Common Causes

Primary Amenorrhea

  • Chromosomal abnormalities (e.g., Turner syndrome) 3
  • Anatomical abnormalities (e.g., Müllerian agenesis, imperforate hymen, transverse vaginal septum) 3, 4
  • Constitutional delay of growth and puberty 4
  • Hypothalamic dysfunction 5

Secondary Amenorrhea

  1. Polycystic Ovary Syndrome (PCOS) - most common cause 3

    • Features: oligomenorrhea/amenorrhea, hyperandrogenism, polycystic ovaries on ultrasound
    • Often associated with insulin resistance, obesity, hirsutism 6
  2. Functional Hypothalamic Amenorrhea (FHA) - second most common cause 6

    • Triggered by: stress, excessive exercise, weight loss, energy deficit 1
    • Characterized by reduced GnRH pulsatility and low LH levels 6
    • Affects 20-35% of secondary amenorrhea cases 6
  3. Hyperprolactinemia 1, 3

    • May be associated with pituitary adenoma
    • Can cause galactorrhea
    • May result from medications or post-ictal states in epilepsy 6
  4. Primary Ovarian Insufficiency 3

    • Premature depletion of ovarian follicles
    • May occur earlier in women with epilepsy 6
    • Can be caused by autoimmune disorders, genetic factors, or iatrogenic causes (chemotherapy, radiation) 1
  5. Other causes:

    • Thyroid disorders (hypo/hyperthyroidism) 5
    • Pregnancy (most common physiological cause) 7
    • Anatomical abnormalities 4
    • Chronic diseases 2
    • Medication-induced 2

Diagnostic Workup Algorithm

Initial Evaluation for All Patients

  1. Detailed history:

    • Menstrual patterns
    • Pubertal development
    • Weight changes
    • Exercise habits
    • Stress levels
    • Medication use
    • Galactorrhea
    • Symptoms of hyperandrogenism (hirsutism, acne)
    • Neurological symptoms
    • Hot flashes
  2. Physical examination:

    • Height, weight, BMI
    • Secondary sexual characteristics
    • Signs of hyperandrogenism
    • Thyroid examination
    • Breast examination for galactorrhea
    • Pelvic examination to assess genital tract anatomy
  3. Initial laboratory tests 1, 2:

    • Pregnancy test (essential first step)
    • FSH, LH levels
    • Prolactin
    • TSH
    • Estradiol

Further Testing Based on Initial Results

If FSH/LH elevated:

  • Suspect primary ovarian insufficiency
  • Karyotype analysis
  • Ovarian antibodies
  • Bone density testing 1

If FSH/LH normal or low with normal prolactin:

  • Consider PCOS or hypothalamic causes
  • Testosterone, DHEAS, androstenedione
  • Fasting glucose, lipid profile
  • Pelvic ultrasound 6

If prolactin elevated:

  • MRI of pituitary 1
  • Review medications

If anatomical abnormality suspected:

  • Pelvic ultrasound
  • MRI of pelvis if needed 4

For suspected FHA-PCOM (functional hypothalamic amenorrhea with polycystic ovarian morphology):

  • Progestin challenge test (often negative in FHA) 6
  • Assess for energy deficit, stress
  • Evaluate LH, testosterone, and SHBG levels 6

Management Considerations

  • PCOS: Lifestyle modifications, hormonal contraceptives, metformin for metabolic issues 3
  • Functional hypothalamic amenorrhea: Address underlying stressors, optimize nutrition and energy availability, modify excessive exercise 1
  • Hyperprolactinemia: Bromocriptine or other dopamine agonists 8
  • Primary ovarian insufficiency: Hormone replacement therapy to prevent osteoporosis and cardiovascular disease 1

Important Clinical Pearls

  • Always exclude pregnancy before extensive workup 3
  • Patients with primary ovarian insufficiency can maintain unpredictable ovarian function and should not be presumed infertile 3, 2
  • Patients with hypothalamic amenorrhea are at risk for decreased bone density 5
  • PCOS patients require screening for metabolic syndrome, glucose intolerance, and dyslipidemia 3
  • FHA-PCOM is a diagnostic challenge that can be misdiagnosed as PCOS; careful evaluation of stress factors and energy balance is crucial 6
  • Bone health monitoring is essential in prolonged hypogonadal states 1

By following this systematic approach, the underlying cause of amenorrhea can be identified and appropriate management initiated to address both the immediate symptoms and long-term health implications.

References

Guideline

Hypogonadism and Amenorrhea Guideline

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Amenorrhea: an approach to diagnosis and management.

American family physician, 2013

Research

Amenorrhea: evaluation and treatment.

American family physician, 2006

Research

Etiology and management of amenorrhea in adolescent and young adult women.

Current problems in pediatric and adolescent health care, 2022

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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