What is the treatment approach for autoimmune encephalitis?

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Last updated: October 24, 2025View editorial policy

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Treatment Approach for Autoimmune Encephalitis

The first-line treatment for autoimmune encephalitis is high-dose corticosteroids (intravenous methylprednisolone), which should be initiated immediately once infection is ruled out based on cerebrospinal fluid results. 1, 2

Diagnostic Workup Prior to Treatment

  • Evaluate the likelihood of autoimmune encephalitis based on clinical presentation, including behavioral changes, seizures, and autonomic dysfunction 1
  • Perform brain MRI and EEG to identify focal or multifocal brain abnormalities 1
  • Conduct lumbar puncture to confirm inflammatory etiology and exclude infectious causes 1
  • Test for neuronal autoantibodies in both cerebrospinal fluid and serum 1
  • Consider brain FDG-PET when clinical suspicion is high but other studies are uninformative 1
  • Perform cancer screening with contrast-enhanced CT of chest, abdomen, and pelvis in relevant cases 1

First-Line Treatment Algorithm

  • Start high-dose corticosteroids (intravenous methylprednisolone 1-2 mg/kg/day or pulse dosing at 1g daily for 3-5 days) once infection is ruled out 1, 2
  • Consider IVIG (0.4 g/kg/day for 5 days) as first-line therapy instead of steroids in patients with:
    • Contraindications to steroids (uncontrolled hypertension, diabetes, acute peptic ulcer) 1
    • Agitated or combative patients 3, 2
    • Patients with bleeding disorders 3, 2
  • Consider PLEX (5-10 sessions performed every other day) as first-line therapy in patients with:
    • Severe hyponatremia 1, 3
    • High thromboembolic risk 1, 3
    • Associated brain or spinal demyelination 3, 2

Treatment Escalation

  • If no clinical, radiological, or electrophysiological improvement is observed after initial treatment with corticosteroids, add IVIG or PLEX 1, 3
  • For severe initial presentations (e.g., NMDAR-antibody encephalitis, new-onset refractory status epilepticus, severe dysautonomia), consider combination therapy with steroids plus IVIG or steroids plus PLEX from the beginning 1, 3
  • If no improvement 2-4 weeks after completion of combined acute therapy, initiate second-line therapy 1

Second-Line Treatment

  • Rituximab is the preferred second-line agent for antibody-mediated autoimmune encephalitis (e.g., NMDAR-antibody encephalitis) 1, 2
  • Consider cyclophosphamide for cell-mediated autoimmunity (e.g., classical paraneoplastic syndrome) 1, 2
  • For patients who fail to respond to conventional second-line therapies, consider experimental treatments such as:
    • IL-6 inhibitors (tocilizumab) 1, 4
    • Bortezomib (plasma cell-depleting agent) 1, 4
    • Intrathecal methotrexate for refractory cases 5

Supportive Care

  • Manage seizures with appropriate antiepileptic medications 1
  • Monitor and treat blood pressure and heart rate fluctuations in patients with dysautonomia 1
  • Consider temporary pacemaker for severe dysrhythmia 1
  • Implement fluid restriction for hyponatremia related to inappropriate antidiuretic hormone secretion 1
  • Monitor intracranial pressure in cases with massive inflammation and brain edema 1

Common Pitfalls and Caveats

  • Delaying immunotherapy while waiting for antibody test results can worsen outcomes; treatment should be initiated promptly once infection is ruled out 1, 6
  • Failure to screen for underlying malignancy may miss paraneoplastic causes of autoimmune encephalitis 1
  • Underestimating the need for escalation to second-line therapy can lead to incomplete recovery and residual neurologic deficits 7
  • For immune checkpoint inhibitor-related autoimmune encephalitis, the checkpoint inhibitor should be permanently discontinued 2
  • Despite clinical improvement with empiric therapy, recovery is often incomplete with substantial residual neurologic deficits 7

Current treatment algorithms are primarily based on observational studies, retrospective series, and expert opinion rather than randomized controlled trials, highlighting the need for higher quality evidence-based therapies 7, 8.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Treatment of Autoimmune Encephalitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Treatment of Autoimmune Encephalitis with IVIG or PLEX

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Diagnostic approach and update on encephalitis.

Current opinion in infectious diseases, 2022

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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