What causes irregular menses?

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Causes of Irregular Menses

Irregular menses are primarily caused by polycystic ovary syndrome (PCOS), functional hypothalamic amenorrhea, hyperprolactinemia, thyroid dysfunction, and primary ovarian insufficiency. 1, 2

Polycystic Ovary Syndrome (PCOS)

  • PCOS is one of the most common causes of irregular menstrual cycles, affecting approximately 4-6% of women in the general population 3
  • The prevalence increases to 10-25% in women with temporal lobe epilepsy 3
  • Characterized by hyperandrogenic chronic anovulation with:
    • Acceleration of pulsatile gonadotropin-releasing hormone (GnRH) secretion
    • Insulin resistance and hyperinsulinemia
    • Hypersecretion of luteinizing hormone (LH)
    • LH:FSH ratio >2 1
    • Polycystic ovarian morphology on ultrasound 1
  • Laboratory findings typically show elevated testosterone levels and increased LH:FSH ratio 3, 1

Functional Hypothalamic Amenorrhea (FHA)

  • Accounts for approximately 20-35% of secondary amenorrhea cases 1
  • Characterized by chronic anovulation without identifiable organic causes 1
  • Main contributing factors include:
    • Stress and increased stress sensitivity
    • Vigorous exercise patterns (common in athletes)
    • Weight loss and low BMI
    • Psychological disorders
    • Caloric restriction or energy deficit 1, 2
  • Laboratory findings include low/normal FSH and LH levels 1
  • In athletes, this is part of the female athlete triad or Relative Energy Deficiency in Sport (RED-S) 3, 2

Hyperprolactinemia

  • Accounts for approximately 20% of secondary amenorrhea cases 1
  • May present with galactorrhea and irregular menses 1
  • Causes include:
    • Pituitary adenomas
    • Medications (antipsychotics, antidepressants)
    • Hypothyroidism
    • Chronic renal failure 1
  • Laboratory findings include elevated serum prolactin levels 1

Thyroid Dysfunction

  • Both hypothyroidism and hyperthyroidism can cause menstrual irregularities 1, 2
  • Altered thyroid hormone levels affect the hypothalamic-pituitary-ovarian axis 2
  • Laboratory findings include abnormal TSH levels 1

Primary Ovarian Insufficiency (POI)

  • Characterized by elevated FSH and LH levels 1
  • Can occur due to:
    • Genetic factors
    • Autoimmune disorders
    • Iatrogenic causes (chemotherapy, radiation)
    • Infections 1, 4

Chronic Liver Disease

  • Advanced liver disease can cause menstrual irregularities in >25% of women 3
  • Altered estrogen metabolism and disruption of the hypothalamic-pituitary axis lead to anovulation and amenorrhea 3
  • Nearly 75% of premenopausal women awaiting liver transplant experience amenorrhea 3

Other Causes

  • Autoimmune disorders may contribute to PCOS and irregular menses 5
  • Epilepsy can directly affect the hypothalamic-pituitary axis 3
  • Excessive alcohol intake affects the hypothalamic-pituitary axis or directly affects ovarian function 3
  • Medications (e.g., antipsychotics, hormonal contraceptives) 4
  • Structural abnormalities of the reproductive tract 4

Special Entity: FHA-PCOM

  • Affects approximately 40-47% of women with FHA 1
  • Features characteristics of both FHA and polycystic ovarian morphology 1
  • Can be misdiagnosed as PCOS as they fulfill Rotterdam criteria 1
  • Differentiation based on typical FHA triggers, negative progestin challenge, and lower LH levels 1

Health Implications of Irregular Menses

  • Increased risk of endometrial hyperplasia and cancer due to unopposed estrogen 6
  • Decreased bone mineral density and increased risk of osteoporosis 3, 2
  • Associated with metabolic syndrome, coronary heart disease, and type 2 diabetes 7
  • Fertility issues and potential pregnancy complications 7, 4
  • Psychological impact affecting quality of life 7

Irregular menstruation should be considered an important health indicator requiring thorough evaluation and appropriate management to prevent long-term health consequences 7.

References

Guideline

Major Causes of Secondary Amenorrhea

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Estrogen Deficiency and Secondary Amenorrhea

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Menstrual Dysfunction in PCOS.

Clinical obstetrics and gynecology, 2021

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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