What is the initial treatment approach for microscopic colitis?

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Last updated: October 28, 2025View editorial policy

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Initial Treatment Approach for Microscopic Colitis

Budesonide is strongly recommended as the first-line treatment for induction of clinical remission in patients with symptomatic microscopic colitis, based on high-quality evidence. 1, 2

First-Line Treatment Algorithm

  1. Identify and discontinue potential triggering medications

    • Consider discontinuation of NSAIDs, proton pump inhibitors (PPIs), and selective serotonin reuptake inhibitors (SSRIs) when clinically feasible 2, 3
    • Smoking cessation should be encouraged as smoking is a risk factor 4, 3
  2. For mild symptoms:

    • Begin with antidiarrheal agents such as loperamide for immediate symptomatic relief 4, 3
    • These can be used as adjunctive therapy alongside other treatments 3
  3. For moderate to severe symptoms:

    • Budesonide is the treatment of choice with strong recommendation and high-quality evidence 1, 2
    • Typical induction dosing is 9 mg daily for 8 weeks 2
    • Budesonide has demonstrated superior efficacy compared to other treatments and significantly improves quality of life 1, 2
  4. If budesonide therapy is not feasible:

    • Mesalamine is suggested as an alternative (conditional recommendation, moderate quality evidence) 1, 2
    • Bismuth salicylate can be considered (conditional recommendation, low quality evidence) 1, 2
    • Prednisolone/prednisone may be used (conditional recommendation, very low quality evidence) 1, 2

Maintenance Therapy

  • For patients who experience symptom recurrence after discontinuation of induction therapy, budesonide is strongly recommended for maintenance of clinical remission 1
  • Maintenance therapy with budesonide 6 mg daily over 6 months reduces the risk of clinical relapse by 66% (relative risk 0.34,95% CI 0.19-0.6) 1
  • In clinical practice, budesonide is commonly tapered to the lowest effective dose 1
  • Maintenance therapy should be considered for 6-12 months before attempting discontinuation 1
  • Up to one-third of patients may not require maintenance therapy 1

Treatment Considerations and Monitoring

  • Despite low systemic bioavailability, prolonged use of budesonide may predispose to bone loss 1
  • Osteoporosis prevention and screening should be considered in patients requiring maintenance therapy 1
  • The goal of therapy is to reduce the number of bowel movements, improve stool consistency, and enhance quality of life 3, 5

Not Recommended Treatments

  • Combination therapy with cholestyramine and mesalamine is not recommended over mesalamine alone 1, 2
  • Boswellia serrata is not recommended 1, 2
  • Probiotics are not recommended 1, 2

Management of Refractory Disease

  • For patients with budesonide-refractory disease, re-evaluate for other causes of diarrhea, including celiac disease 2, 6
  • Consider immunomodulators (response rates 0%-56%) or anti-TNF therapy (response rates 66%-100%) for truly refractory cases 7
  • Multidisciplinary team discussion is recommended for management of refractory cases 6

Clinical Pearls

  • Microscopic colitis is a common cause of chronic watery diarrhea, particularly in older women 4, 5
  • The colon typically appears normal endoscopically, making histologic evaluation essential for diagnosis 4, 5
  • The disease course is variable; some patients experience occasional symptoms while others have chronic or progressive symptoms 4
  • Relapse rates are high (up to 82%) when budesonide is discontinued, necessitating careful monitoring 7

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Microscopic Colitis Treatment Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Management of microscopic colitis: challenges and solutions.

Clinical and experimental gastroenterology, 2019

Research

Microscopic Colitis: A Concise Review for Clinicians.

Mayo Clinic proceedings, 2021

Research

[Not Available].

La Revue de medecine interne, 2020

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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