Stool Sample Analysis for IBD Diagnosis
In patients presenting with chronic diarrhea or suspected IBD, use fecal calprotectin or fecal lactoferrin as first-line screening tests to identify inflammatory bowel disease before proceeding to endoscopy. 1
Recommended Biomarkers and Thresholds
Fecal Calprotectin
- Use a threshold of 50 μg/g to optimize sensitivity for detecting IBD (pooled sensitivity 81%, specificity 87%). 1
- Higher thresholds improve specificity: 100 μg/g provides 78% specificity, while 250 μg/g provides 82% specificity, though at the cost of reduced sensitivity (80%). 1
- Calprotectin correlates well with endoscopic inflammation in both ulcerative colitis and Crohn's disease. 1
Fecal Lactoferrin
- Use threshold values of 4.0–7.25 μg/g to optimize sensitivity for IBD screening. 1
- Lactoferrin shows comparable diagnostic accuracy to calprotectin, with overall sensitivity of 80%, specificity of 85%, and diagnostic efficacy of 81%. 2
- Lactoferrin correlates particularly well with histological inflammation. 2
Clinical Algorithm for Use
For Initial IBD Screening (Chronic Diarrhea)
- Order either fecal calprotectin OR fecal lactoferrin (not both routinely, as they show 90% concordance). 3
- If calprotectin <50 μg/g or lactoferrin is negative: IBD is effectively ruled out (high negative predictive value). 4
- If calprotectin 50-250 μg/g: Consider repeat testing in 3-6 months or proceed to colonoscopy based on symptom severity. 5
- If calprotectin >250 μg/g: Urgent gastroenterology referral and colonoscopy indicated. 4
For Monitoring Known IBD
- In symptomatic remission with calprotectin <150 μg/g: Active inflammation is reliably ruled out, endoscopy not needed. 1
- In symptomatic remission with calprotectin >150 μg/g: Proceed to endoscopic assessment rather than empiric treatment escalation. 1
- With mild symptoms and normal biomarkers: Still proceed to endoscopic assessment, as normal markers cannot rule out active inflammation in symptomatic patients. 1
Practical Considerations and Pitfalls
Sample Collection
- Collect the first stool passed in the morning for optimal accuracy. 1
- Store samples for no more than 3 days at room temperature before analysis to maintain stability. 1
Factors That Affect Results
- NSAID use within the past 6 weeks can falsely elevate calprotectin levels and must be considered when interpreting results. 4
- Hemorrhoids can cause false elevations due to local bleeding and inflammation. 4
- Other conditions that elevate calprotectin include infectious gastroenteritis and colorectal cancer. 4
When NOT to Use Calprotectin
- Do not use calprotectin in patients with alarm symptoms (rectal bleeding with abdominal pain, change in bowel habit, weight loss, or iron-deficiency anemia) as it cannot exclude colorectal cancer—these patients require cancer pathway referral regardless of calprotectin result. 1
- Insufficient data exist for using calprotectin in acute infectious diarrhea. 6
Comparison to Serum Markers
Do not use ESR or CRP as primary screening tests for IBD—they are inferior to fecal markers. 1 CRP shows pooled sensitivity of only 49% and specificity of 92% for detecting endoscopic activity, significantly lower than fecal calprotectin (88% sensitivity, 73% specificity) or lactoferrin (82% sensitivity, 79% specificity). 7 However, if fecal markers are unavailable or not covered by insurance, CRP may be considered as a reasonable alternative. 1
Ordering Patterns in Practice
Gastroenterologists predominantly order calprotectin in the context of abdominal pain and IBD monitoring, while primary care providers more commonly order lactoferrin for acute diarrhea evaluation. 3 Calprotectin orders have increased from 60% to nearly 90% of all fecal inflammatory marker orders over the past decade, reflecting growing preference for this biomarker. 3