What are the causes and treatments of brown spots on the penis?

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Brown Spots on the Penis: Causes and Management

Brown spots on the penis require immediate biopsy if they are pigmented, indurated, fixed, or ulcerated, as melanoma of the penis, though rare, carries a very poor prognosis and early diagnosis is paramount. 1, 2

Diagnostic Approach

Immediate Biopsy Indications

The British Association of Dermatologists mandates biopsy for:

  • Any pigmented areas to exclude abnormal melanocytic proliferation 1
  • Lesions that are indurated, fixed, or ulcerated 3
  • Persistent areas of hyperkeratosis, erosion, or erythema 1
  • New warty or papular lesions 1
  • Disease failing to respond to adequate treatment 1

Dermoscopy should be used systematically for all pigmented penile lesions, as it can reveal characteristic patterns such as prominent, wide, irregular pigment networks that suggest melanoma in situ. 2

Key Differential Diagnoses for Brown/Pigmented Penile Lesions

1. Melanoma (Most Critical)

  • Presents as asymptomatic brown macules or patches 2
  • Melanoma in situ of the penis is extremely rare but has very poor prognosis if not caught early 2
  • Requires urgent referral to specialist urologist for excision and staging 1

2. Bowen's Disease of the Penis (Penile Intraepithelial Neoplasia)

  • Appears as red, sometimes slightly pigmented, scaly patches and plaques on keratinized penis 1
  • Has malignant transformation potential to squamous cell carcinoma 1
  • Risk factors include lack of circumcision, HPV infection, and lichen sclerosus 1
  • Early biopsy is clearly indicated before treatment 1

3. Bowenoid Papulosis

  • Occurs in younger, sexually active men 1
  • Presents as raised papules on glans, shaft, prepuce, and groin 1
  • Associated with HPV exposure and has full-thickness dysplasia histologically 1
  • Must be distinguished from benign pearly penile papules, which are normal anatomical variants requiring only reassurance 4

4. Lichen Sclerosus with Pigmentation

  • Typically presents as porcelain-white plaques but may have pigmented areas 1
  • Requires biopsy to exclude abnormal melanocytic proliferation 1
  • Associated with increased risk of squamous cell carcinoma, requiring long-term follow-up 1
  • Affects prepuce, coronal sulcus, and glans penis 1

5. Seborrheic Keratoses

  • Can present as skin-colored papules and verrucoid plaques 5
  • Clinically may resemble condyloma acuminatum 5
  • Benign but requires histologic evaluation to confirm diagnosis 5

6. Normal Variants

  • Penile hyperpigmentation is a normal variant, particularly in darker-skinned individuals 6
  • Removal only appropriate for cosmetic purposes 6
  • Requires clinical distinction from pathologic lesions 6

Common Pitfalls to Avoid

Critical Errors

  • Never confuse pigmented lesions with genital warts and treat with cryotherapy, podophyllin, or imiquimod without biopsy 1, 4
  • Do not assume brown spots are benign without proper evaluation, as melanoma can present as asymptomatic brown macules 2
  • Avoid dismissing pigmented areas in lichen sclerosus patients without biopsy, as these require exclusion of melanocytic proliferation 1

Diagnostic Confusion

  • Bowenoid papulosis can be confused with pearly penile papules, but the former has malignant potential while the latter is entirely benign 4
  • Seborrheic keratoses may clinically mimic condyloma acuminatum, requiring histologic differentiation 5

Management Algorithm

Step 1: Clinical Examination

Document the following characteristics:

  • Diameter, location, number of lesions 1
  • Morphology: papillary, nodular, ulcerous, or flat 1
  • Color: brown, pigmented, erythematous, or white 1
  • Texture: indurated, fixed, scaly, or verrucoid 1, 3

Step 2: Risk Stratification

High-risk features requiring urgent biopsy and specialist referral:

  • Any pigmented lesion with irregular borders or changing appearance 2
  • Ulceration, induration, or fixation 3
  • Persistent hyperkeratosis or erosion 1
  • Failure to respond to treatment 1

Step 3: Biopsy Technique

  • Punch, excisional, or incisional biopsy for histologic diagnosis 1
  • For suspected melanoma, ensure adequate sampling 2
  • Multiple mapping biopsies may be required if extensive abnormality present 1

Step 4: Specialist Referral

  • Urgent referral to specialist urologist for lesions highly suspicious of squamous cell carcinoma or melanoma 1
  • Multidisciplinary approach with dermatologist and urologist for complex cases 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Melanoma of the glans penis.

European journal of dermatology : EJD, 2005

Guideline

Treatment and Management of Balanitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Treatment of Pearly Penile Papules

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Seborrheic keratoses of penis.

Urology, 1987

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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