What are the steps for testing and diagnosing celiac disease?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: December 2, 2025View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

Celiac Disease Testing and Diagnosis

Initial Serological Testing

Begin with IgA tissue transglutaminase antibody (tTG-IgA) as the first-line screening test while the patient is consuming a gluten-containing diet, followed by intestinal biopsy for confirmation in adults. 1

Primary Screening Test

  • tTG-IgA is the preferred initial test with sensitivity of 90-96% and specificity >95% 1, 2
  • Measure total IgA level simultaneously to rule out IgA deficiency, which occurs in 1-3% of celiac patients and causes false-negative results 1, 2
  • Testing must be performed while consuming adequate gluten: at least 10g daily (approximately 3 slices of wheat bread) for 6-8 weeks 1, 2

Confirmatory Serological Testing

  • If tTG-IgA is >10× upper limit of normal, perform IgA endomysial antibody (EMA-IgA) as confirmatory test with excellent specificity of 99.6% 1, 2
  • The combination of tTG-IgA >10× upper limit of normal plus positive EMA-IgA approaches 100% positive predictive value for celiac disease 1

Intestinal Biopsy (Gold Standard)

Upper endoscopy with small bowel biopsy remains the gold standard for diagnosis in adults, even with highly positive serology. 1, 2

Biopsy Technique

  • Obtain at least 6 biopsy specimens total: 1-2 from the duodenal bulb and at least 4 from the second part of the duodenum or beyond 1, 2
  • This multi-site sampling increases diagnostic accuracy and accounts for patchy distribution of villous atrophy 1

Histologic Findings

  • Characteristic findings include villous atrophy, crypt lengthening, and increased intraepithelial lymphocytes 1, 2
  • Marsh classification is used to grade severity of intestinal damage 2

Special Testing Scenarios

IgA Deficiency

  • In IgA-deficient patients, use IgG-based tests: IgG deamidated gliadin peptide (DGP-IgG) or IgG tissue transglutaminase (tTG-IgG) 1, 2
  • IgG-based tests should NOT be used in patients with normal IgA levels, as they are markedly less accurate in this setting 1

Children Under 2 Years

  • Combine tTG-IgA with IgG and IgA deamidated gliadin peptides to improve sensitivity 1, 2

Pediatric Biopsy-Avoidance Protocol

  • In children with tTG-IgA ≥10× upper limit of normal, positive EMA-IgA, AND positive HLA-DQ2/DQ8, biopsy may be avoided 1, 2
  • This protocol does NOT apply to adults, who should still undergo biopsy confirmation 1

Genetic Testing (HLA-DQ2/DQ8)

HLA testing has >99% negative predictive value—absence of both DQ2 and DQ8 alleles essentially rules out celiac disease. 1

When to Use HLA Testing

  • Celiac disease strongly suspected despite negative serology 1
  • Equivocal biopsy findings 1
  • Patient already on gluten-free diet who was never properly tested 1
  • Discrepant serology and histology results 2

Diagnostic Algorithm for Negative Serology with High Clinical Suspicion

  1. Confirm adequate gluten intake (at least 10g daily for 6-8 weeks) 1
  2. Verify total IgA level is normal (not IgA deficient) 1
  3. Perform HLA-DQ2/DQ8 testing—if positive, proceed to biopsy 1
  4. If patient already started gluten-free diet, resume normal diet with 3 slices of wheat bread daily for 1-3 months (some patients may require several years for histologic relapse) before repeat testing 1

Critical Pitfalls to Avoid

Never Start Gluten-Free Diet Before Testing

  • Initiating gluten-free diet before completing diagnostic workup leads to false-negative results and inconclusive biopsies 1, 2
  • This is the most common diagnostic error in celiac disease 1

Do Not Rely on Serology Alone in Adults

  • Biopsy confirmation is required in adults to avoid misdiagnosis, even with highly positive serology 1, 2
  • Seronegative celiac disease can occur and requires biopsy for diagnosis 1

Avoid IgG Testing in Non-IgA Deficient Patients

  • IgG-based tests have poor specificity in patients with normal IgA levels and should not be used 1

Post-Diagnosis Follow-Up Testing

Perform follow-up tTG-IgA at 6 months and 12 months after diagnosis, then yearly thereafter. 1, 2

Interpretation of Follow-Up Serology

  • Negative serology after treatment does NOT guarantee intestinal mucosal healing 1, 2
  • Persistently positive serology usually indicates ongoing gluten exposure and continued intestinal damage 1, 2
  • Serology has low sensitivity (only 50% for tTG-IgA and 45% for EMA-IgA) for detecting persistent villous atrophy in patients on gluten-free diet 3

When to Repeat Biopsy

  • Patients with persistent or relapsing symptoms should undergo repeat endoscopic biopsies to determine healing, even with negative tTG-IgA 1
  • Consider follow-up biopsy in 1-3 years to confirm mucosal healing, especially in severe initial presentation 4

High-Risk Groups Requiring Screening

  • First-degree relatives of celiac patients 1
  • Type 1 diabetes mellitus 1
  • Unexplained iron deficiency anemia 1
  • Autoimmune thyroid disease 1
  • Premature osteoporosis 1
  • Unexplained liver transaminase elevations 1
  • Down syndrome 1

References

Guideline

Celiac Disease Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Celiac Disease Diagnostic Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Evaluating Discordant Celiac Disease Test Results

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.