When to use azithromycin (AZI), clarithromycin (CLA), and doxycycline (DOXY)?

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When to Use Azithromycin, Clarithromycin, and Doxycycline

Azithromycin is the preferred first-line macrolide for most community-acquired respiratory infections, sexually transmitted infections, and pertussis due to its superior pharmacokinetics, once-daily dosing, and excellent tolerability; clarithromycin is reserved for specific indications like H. pylori eradication and nontuberculous mycobacterial infections; doxycycline is the drug of choice for atypical pneumonia pathogens, tick-borne diseases, and as an alternative for chlamydial infections.

Azithromycin: Primary Indications

Respiratory Tract Infections

  • Community-acquired pneumonia (CAP): Azithromycin 500 mg on day 1, then 250 mg daily for days 2-5 covers atypical pathogens (Mycoplasma pneumoniae, Chlamydophila pneumoniae, Legionella) and is recommended as first-line therapy for outpatient CAP 1
  • Acute bacterial sinusitis and otitis media: 3-day course (10 mg/kg/day in children) or 5-day course (10 mg/kg day 1, then 5 mg/kg days 2-5) is as effective as longer courses of other antibiotics 2, 3
  • Pertussis: Azithromycin is the CDC's first-line agent for all ages, especially infants <1 month (10 mg/kg/day for 5 days), due to significantly lower risk of infantile hypertrophic pyloric stenosis compared to erythromycin 4

Sexually Transmitted Infections

  • Uncomplicated chlamydial infections: Single 1-gram dose is equally effective as doxycycline 100 mg twice daily for 7 days, with superior compliance 1
  • Non-gonococcal urethritis/cervicitis: 1 gram single dose is the preferred regimen when compliance is uncertain 1

Other Key Indications

  • Cholera in children: First-choice agent in epidemic situations where single-dose treatment is critical (20 mg/kg single dose, maximum 1 gram) 1
  • Bartonellosis (bacillary angiomatosis): Alternative to erythromycin/doxycycline at 5-12 mg/kg/day (maximum 600 mg) 1
  • Nontuberculous mycobacterial infections: Component of multi-drug regimens for M. avium complex and M. abscessus when macrolide-susceptible 1

Pharmacokinetic Advantages

  • Tissue concentrations remain therapeutic for 7-10 days after a 5-day course due to prolonged tissue half-life (approximately 3 days), enabling shorter treatment durations 5, 6, 3
  • Concentrates 10-100 times higher in tissues than serum, particularly in respiratory tract, gynecological tissues, and phagocytic cells 3
  • Minimal drug interactions compared to clarithromycin and erythromycin (does not inhibit cytochrome P450) 4, 6

Clarithromycin: Specific Indications

When to Choose Clarithromycin Over Azithromycin

  • Nontuberculous mycobacterial pulmonary disease: Clarithromycin is preferred over azithromycin for M. avium complex when macrolide-susceptible, though both are acceptable 1
  • Alternative for atypical pneumonia: Clarithromycin 500 mg twice daily for 10 days is an alternative when azithromycin is unavailable, though it requires twice-daily dosing 1
  • Chlamydial infections in pregnancy: Not recommended due to lack of safety data; erythromycin or amoxicillin preferred 1

Important Limitations

  • Drug interactions: Clarithromycin inhibits cytochrome P450 enzymes, causing significant interactions with digoxin, triazolam, ergot alkaloids, and other medications 4
  • Infantile hypertrophic pyloric stenosis risk: Contraindicated in infants <1 month, similar to erythromycin 4
  • Reduced serum concentrations: When used with rifampin for mycobacterial infections, therapeutic drug monitoring may be necessary 1

Doxycycline: Primary Indications

Respiratory Infections with Atypical Pathogens

  • Mycoplasma pneumoniae: Doxycycline 100 mg twice daily for 7-14 days is the preferred first-line agent (alternative: azithromycin) 1
  • Chlamydophila pneumoniae: Doxycycline 100 mg twice daily for 10 days is an alternative to azithromycin 1
  • Community-acquired pneumonia: Add to beta-lactam therapy for hospitalized patients to cover atypical pathogens 1

Sexually Transmitted Infections

  • Chlamydial infections: Doxycycline 100 mg twice daily for 7 days is equally effective as azithromycin 1-gram single dose, but requires better compliance 1
  • Contraindicated in pregnancy: Use erythromycin or amoxicillin instead 1

Tick-Borne and Vector-Borne Diseases

  • Lyme disease prophylaxis: Single dose of 4 mg/kg (maximum 200 mg) within 72 hours of high-risk Ixodes scapularis tick bite in children ≥8 years 7
  • Bartonellosis: Doxycycline 2-4 mg/kg/day (maximum 100-200 mg) for 3 months is preferred over erythromycin for cutaneous bacillary angiomatosis 1

Age Restrictions

  • Avoid in children <8 years: Risk of permanent tooth discoloration and enamel hypoplasia, except when benefits outweigh risks (e.g., life-threatening infections) 7
  • Pregnancy category D: Contraindicated in pregnancy 1

Clinical Decision Algorithm

For Respiratory Tract Infections:

  1. Outpatient CAP or atypical pneumonia suspected: Start azithromycin 500 mg day 1, then 250 mg days 2-5 1
  2. Confirmed Mycoplasma or Chlamydophila pneumonia: Doxycycline 100 mg twice daily for 7-14 days is preferred 1
  3. Hospitalized CAP: Add azithromycin to beta-lactam for atypical coverage 1
  4. Pertussis (any age): Azithromycin is first-line; avoid erythromycin in infants <6 months 4

For Sexually Transmitted Infections:

  1. Uncomplicated chlamydia with uncertain compliance: Azithromycin 1 gram single dose 1
  2. Uncomplicated chlamydia with reliable follow-up: Doxycycline 100 mg twice daily for 7 days (lower cost) 1
  3. Pregnancy: Use erythromycin base 500 mg four times daily for 7 days or amoxicillin 500 mg three times daily for 7-10 days 1

For Nontuberculous Mycobacterial Infections:

  1. Macrolide-susceptible M. avium complex: Either azithromycin or clarithromycin as part of multi-drug regimen 1
  2. Macrolide-resistant strains: Include macrolide for immunomodulatory effects only, not as active agent 1

Common Pitfalls and Caveats

Azithromycin

  • Do not administer with aluminum/magnesium antacids: Reduces absorption significantly 4
  • Not effective for MRSA or Pseudomonas: Add clindamycin/vancomycin or antipseudomonal beta-lactam if suspected 1
  • Resistance concerns: Increasing macrolide resistance in S. pneumoniae may limit effectiveness in some regions 1

Clarithromycin

  • Check for drug interactions: Particularly with statins, anticoagulants, and antiarrhythmics due to P450 inhibition 4
  • Avoid in infants <1 month: Risk of infantile hypertrophic pyloric stenosis 4

Doxycycline

  • Administer with 8 ounces of fluid: Reduces esophageal irritation risk 7
  • Photosensitivity warning: Advise sun avoidance during treatment 7
  • Not for children <8 years or pregnant women: Except in life-threatening situations where benefits outweigh risks 7
  • Take with food: Reduces gastrointestinal intolerance without significantly affecting absorption 7

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Azithromycin: the first of the tissue-selective azalides.

International journal of antimicrobial agents, 1995

Guideline

Treatment of Pertussis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Azithromycin and clarithromycin: overview and comparison with erythromycin.

Infection control and hospital epidemiology, 1992

Research

Azithromycin: the first azalide antibiotic.

The Annals of pharmacotherapy, 1992

Guideline

Pediatric Doxycycline Dosing for Lyme Disease Prophylaxis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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