What is the recommended treatment for Mycoplasma genitalium?

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Treatment for Mycoplasma genitalium

First-line treatment for Mycoplasma genitalium is azithromycin 500 mg orally on day 1, followed by 250 mg daily for days 2-5 (total 1.5 g extended regimen), which achieves 93-99% cure rates while minimizing macrolide resistance development. 1

Diagnostic Testing Before Treatment

  • Perform nucleic acid amplification testing (NAAT) to confirm M. genitalium infection before initiating therapy. 1
  • Test simultaneously for gonorrhea and chlamydia, as co-infections are common and require different treatment approaches. 1
  • If available, obtain macrolide resistance testing to guide antibiotic selection, as resistance now exceeds 50% in many regions. 2, 3, 4

First-Line Treatment Algorithm

For Macrolide-Susceptible or Unknown Resistance Status:

  • Azithromycin 500 mg orally on day 1, then 250 mg orally daily for days 2-5 (extended regimen, total 1.5 g). 1, 2, 3
  • This extended regimen is superior to the single 1 g dose, with cure rates of 95-99% versus 85-95%. 2, 3, 5
  • The extended regimen prevents development of macrolide resistance, whereas the 1 g single dose induces resistance in 100% of treatment failures. 5

Critical Pitfall to Avoid:

Do not use azithromycin 1 g single dose for M. genitalium, despite its listing in older guidelines. 1 This regimen has lower efficacy and drives macrolide resistance development in all treatment failures. 5 The 2024 European Association of Urology guidelines list only the extended regimen. 1

Second-Line Treatment (Macrolide-Resistant Infections)

For Confirmed Macrolide Resistance or Treatment Failure:

  • Moxifloxacin 400 mg orally once daily for 7-14 days. 1, 2, 3
  • Use 7 days for uncomplicated urethritis/cervicitis. 1, 3
  • Use 14 days for complicated infections (pelvic inflammatory disease, epididymitis). 2, 3
  • Cure rate is 92% when used as resistance-guided therapy. 4

Important Caveat:

Quinolone resistance is increasing (22% of macrolide-resistant cases have ParC mutations), threatening moxifloxacin efficacy. 4 However, it remains the best second-line option currently available.

Third-Line Treatment (Persistent Infection)

After Both Azithromycin and Moxifloxacin Failure:

  • Doxycycline 100 mg orally twice daily for 14 days may cure 40-70% of persistent infections. 3
  • Pristinamycin 1 g orally four times daily for 10 days achieves approximately 75-90% cure rates. 2, 3

Why Doxycycline Is Not First-Line:

Doxycycline monotherapy has only 30-40% cure rate for M. genitalium (43% in clinical studies), making it inadequate as initial therapy. 2, 3, 6, 5 However, it does not induce resistance and may have a role in persistent infections. 2, 3

Resistance-Guided Sequential Therapy (Emerging Strategy)

Pre-treatment with doxycycline 100 mg twice daily for 7 days followed by resistance-guided therapy (azithromycin 2.5 g for susceptible strains or moxifloxacin for resistant strains) achieves 95% cure rates. 3, 4 This approach may decrease organism load and reduce macrolide resistance selection. 3

Patient Instructions and Follow-Up

  • Patients must abstain from sexual intercourse for 7 days after completing single-dose therapy or until completion of multi-day regimens. 1
  • Sexual partners require evaluation and treatment to prevent reinfection, even if asymptomatic. 1
  • Test of cure is not routinely recommended if symptoms resolve with first-line therapy. 1
  • Patients should return for evaluation if symptoms persist or recur, as this indicates treatment failure requiring resistance testing and alternative therapy. 1
  • Repeat testing at 3-6 months is recommended due to high reinfection rates. 1

Key Differences Between Guidelines

The 2024 European Association of Urology guidelines 1 list only azithromycin 500 mg on day 1 (without specifying the extended regimen duration) for M. genitalium, while the 2021 European guideline 3 and 2016 European guideline 2 explicitly recommend the full 5-day extended regimen. The older 2010 CDC guidelines 1 recommend azithromycin 1 g single dose, which is now known to be suboptimal. Follow the extended 5-day azithromycin regimen based on the most recent high-quality evidence. 2, 3, 4, 5

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

2016 European guideline on Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2016

Research

2021 European guideline on the management of Mycoplasma genitalium infections.

Journal of the European Academy of Dermatology and Venereology : JEADV, 2022

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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