Workup for Viral Gastroenteritis
In most clinical scenarios, viral gastroenteritis is a clinical diagnosis that requires no laboratory workup, as testing rarely changes management and the condition is self-limited. 1, 2
When Laboratory Testing Is NOT Indicated
For typical presentations in immunocompetent patients, no diagnostic workup is necessary. The diagnosis is clinical, based on:
- Acute onset of nausea and vomiting 3
- Watery, non-bloody diarrhea (may develop 24-48 hours after vomiting) 1
- Low-grade fever (high fever >39°C occurs in only one-third of cases) 1
- Duration of 12-60 hours for Norovirus or 3-8 days for rotavirus 1
- Absence of severe abdominal pain, peritoneal signs, or bloody diarrhea 1
Serum electrolytes, creatinine, and glucose measurements are unnecessary in most cases and should only be considered in children with severe dehydration requiring hospitalization and IV therapy. 4
When Diagnostic Testing IS Indicated
Individual Patient Testing
Testing should be pursued when:
- Bloody diarrhea is present - this is atypical for viral gastroenteritis and requires investigation for bacterial or other causes 2
- Immunocompromised patients with severe symptoms require endoscopic biopsy to diagnose CMV gastroenteritis, as peripheral blood or stool testing is insufficient 2
- Severe or localized abdominal pain that raises concern for surgical pathology (appendicitis, obstruction) requires CBC, basic metabolic panel, and urinalysis 1
Outbreak Investigation
Specimen collection is only indicated during outbreak investigations and must be done within the first 48 hours of illness onset. 3
Stool Specimens for Outbreak Investigation
- Collect within first 48 hours - viral shedding drops below detectable levels (1 million particles/ml) after 2-3 days 3, 5
- Bulk specimens from at least 10 ill persons - specimens must be loose enough to assume the shape of their containers; formed stools have low diagnostic yield 3
- Rectal swabs have no diagnostic value 2
- Store at +4°C, never freeze - freezing destroys viral morphology needed for electron microscopy diagnosis 3, 5
Paired Serum Specimens (Essential for Outbreak Diagnosis)
- Acute phase: Collect during first week of symptoms 3
- Convalescent phase: Collect during third to sixth week 3
- Quantity needed: 10 pairs from ill persons (same persons who submitted stool), 10 pairs from well persons 3
- Volume: Adults 10 ml, children 3 ml 3
- Collection: Use tubes without anticoagulant (red top tubes), spin off and freeze sera 3
Critical Pitfalls to Avoid
- Do not delay oral rehydration therapy waiting for laboratory results - begin rehydration immediately based on clinical assessment 2
- Do not collect specimens after 48 hours of illness - diagnostic yield becomes negligible as viral shedding decreases 3, 5
- Do not test vomitus, water, food, or environmental samples - viruses causing gastroenteritis cannot normally be detected in these specimens 3
- Do not assume viral etiology if bloody diarrhea is present - this requires investigation for bacterial causes 2
Red Flags Requiring Alternative Workup
Pursue alternative diagnoses with appropriate testing if:
- Prominent epigastric pain with focal tenderness - less typical for viral gastroenteritis which causes diffuse cramping 1
- Constipation rather than diarrhea - not typical of viral gastroenteritis and may indicate obstruction 1
- Fever >39°C or persisting beyond 48 hours 1
- Bilious vomiting - requires immediate imaging to rule out malrotation with volvulus 1
- Peritoneal signs (rebound, guarding, rigidity) - indicates surgical pathology requiring imaging 1