What is fecal calprotectin?

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What is Fecal Calprotectin?

Fecal calprotectin is a calcium- and zinc-binding protein derived primarily from neutrophil cytoplasm that serves as a highly sensitive, non-invasive biomarker of intestinal inflammation. 1, 2

Origin and Biological Basis

  • Calprotectin is a member of the S-100 protein family found abundantly in neutrophils throughout the human body 2
  • Its presence in stool results from neutrophil migration into gastrointestinal tissue during inflammatory processes 2
  • The protein has direct antimicrobial functions and plays a role in regulating the innate immune response 3
  • Fecal concentrations correlate directly with the level of mucosal inflammation 3

Primary Clinical Applications

Distinguishing IBD from IBS

  • Fecal calprotectin has excellent negative predictive value for ruling out inflammatory bowel disease (IBD) in symptomatic patients with undiagnosed gastrointestinal complaints 1, 4
  • Normal levels (<50 μg/g) effectively exclude IBD, making it particularly useful for differentiating IBD from irritable bowel syndrome (IBS) 1
  • The European Society of Gastrointestinal Endoscopy recommends fecal calprotectin as a useful non-invasive biomarker for this differentiation 1

Monitoring Disease Activity in IBD

  • Calprotectin correlates well with endoscopic inflammation in both ulcerative colitis and Crohn's disease 1, 4
  • A meta-analysis demonstrated that calprotectin cutoff of 50 μg/g had 90.6% sensitivity to detect endoscopically active disease 1
  • Levels >100 μg/g provided 78.2% specificity for active endoscopic inflammation 1
  • The biomarker provides evidence of relapse or mucosal healing, guiding treatment escalation or de-escalation decisions 1

Predicting Disease Course

  • Clinically inactive disease with raised calprotectin levels predicts future relapse 1
  • Calprotectin successfully predicts relapses and detects pouchitis in IBD patients 4
  • Serial monitoring at 3-6 month intervals facilitates early recognition of impending disease flares 1

Diagnostic Thresholds and Interpretation

Threshold Recommendations

  • The American Gastroenterological Association recommends higher thresholds (100-250 μg/g) to trigger colonoscopy, which improves positive predictive value with minimal reduction in negative predictive value 1
  • For patients with moderate to severe symptoms suggestive of IBD flare, calprotectin >150 μg/g reliably suggests moderate to severe endoscopic inflammation 1
  • Levels <100 μg/g suggest IBS is likely in patients aged 16-40 with new lower gastrointestinal symptoms 1
  • Levels 100-250 μg/g warrant consideration of repeat testing or routine gastroenterology referral 1
  • Levels >250 μg/g indicate need for urgent gastroenterology referral 1

Correlation with Disease Severity

  • Patients with clinically active Crohn's disease show higher calprotectin levels (405 μg/g) compared to those with quiescent disease (213 μg/g) 5
  • In ulcerative colitis, active disease demonstrates levels of 327 μg/g versus 123 μg/g in quiescent disease 5
  • Calprotectin demonstrates stronger correlation with extent of inflamed surface (r = 0.86) than region of maximal severity (r = 0.79) 6

Important Limitations and Caveats

Disease Location Affects Performance

  • Performance is weaker for isolated proctitis (r = 0.54) compared with left-sided colitis (r = 0.75) or extensive colitis (r = 0.78) 6
  • Fecal biomarkers may be less accurate in detecting endoscopic inflammation in patients with ulcerative proctitis or limited segmental disease 6
  • Elevation is influenced by the extent and location of inflamed surface 6

Lack of Specificity

  • Calprotectin is elevated in various inflammatory conditions beyond IBD, including infectious gastroenteritis, colorectal cancer, and microscopic colitis 1, 3
  • The biomarker is not sensitive enough to exclude advanced colorectal adenoma or colorectal carcinoma 1
  • NSAID use in the past 6 weeks can significantly elevate calprotectin levels through direct mucosal injury 1, 7
  • Hemorrhoids can cause false elevations due to local bleeding and inflammation 1

Test Variability Issues

  • Fecal calprotectin assays may not be interchangeable, and the same assay should be used for a given patient to compare results over time 6
  • Five studies comparing different assays identified discrepancies ranging from 2.5- to 5-fold differences when testing the same stool sample 6
  • Within-patient variability ranges from 13% to 114% using the same assay repeatedly with different stool samples 6
  • Variation in results testing different regions of the same stool sample ranges from 3% to 31% 6
  • If borderline or unexpected results occur, repeat fecal calprotectin testing or endoscopic evaluation for confirmation may be required 6

Detection Limitations

  • Biomarkers may be suboptimal for detecting endoscopic remission (Mayo Endoscopic Score 0) or histologic remission 6
  • Performance to distinguish endoscopic remission (MES 0) versus mild endoscopic activity (MES 1) is limited 6
  • Test performance reflects ability to rule out moderate to severe endoscopic inflammation (MES 2 or 3) 6

Practical Testing Considerations

Sample Collection and Handling

  • The British Society of Gastroenterology recommends using the first stool passed in the morning for sampling 1
  • Samples should be stored for no more than 3 days at room temperature before analysis 1
  • Proper collection technique is essential to avoid falsely elevated or degraded results 7

When to Order the Test

  • For patients aged 16-40 with new lower gastrointestinal symptoms (>4 weeks) where IBD is suspected 1
  • In patients with IBD in symptomatic remission, measure every 6-12 months 1
  • For patients with IBD and mild symptoms with elevated calprotectin (>150 μg/g), endoscopic assessment is suggested rather than empiric treatment adjustment 1

References

Guideline

Calprotectin as a Biomarker for Intestinal Inflammation

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Faecal Calprotectin.

The Clinical biochemist. Reviews, 2018

Research

Fecal Calprotectin for the Diagnosis and Management of Inflammatory Bowel Diseases.

Clinical and translational gastroenterology, 2023

Research

Role of faecal calprotectin as non-invasive marker of intestinal inflammation.

Digestive and liver disease : official journal of the Italian Society of Gastroenterology and the Italian Association for the Study of the Liver, 2003

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Elevated Calprotectin Levels: Causes and Next Steps

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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