What is the best course of action for a patient experiencing persistent headache and vomiting, with potential underlying conditions such as meningitis, encephalitis, or brain tumor?

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Persistent Headache and Vomiting: Diagnostic and Management Approach

Immediately rule out life-threatening causes—meningitis, encephalitis, intracranial hemorrhage, and brain tumor—through urgent neuroimaging and CSF analysis before attributing symptoms to benign etiologies. 1, 2

Initial Emergency Assessment

The combination of persistent headache and vomiting constitutes a red flag requiring immediate evaluation for serious intracranial pathology. 3, 4 The priority is excluding conditions with high morbidity and mortality:

Critical Clinical Features to Assess

  • Level of consciousness: Glasgow Coma Scale <15 warrants ICU assessment for airway protection and management of raised intracranial pressure 1
  • Fever presence: High fever with altered mental status suggests intracranial infection requiring urgent workup 5, 1
  • Neurological deficits: Focal signs, seizures, neck stiffness, or cranial nerve palsies indicate serious pathology 5, 1
  • Headache characteristics: Instant peak onset (thunderclap), "worst ever" quality, or association with physical activity raise concern for hemorrhage 6
  • Behavioral changes: New confusion, altered behavior, or personality changes may indicate encephalitis rather than simple meningitis 7, 8

Diagnostic Workup Algorithm

Neuroimaging (First-Line)

MRI brain with and without gadolinium contrast is the preferred imaging modality, detecting early cerebral changes in 90% of cases versus only 25% for CT. 5, 1 However, in acute settings where immediate availability is limited, non-contrast CT head should be obtained first to rule out hemorrhage (98% sensitivity for acute subarachnoid hemorrhage). 5

Key MRI sequences to include: 5

  • T2 FLAIR (sensitive for vasogenic edema and meningeal enhancement)
  • Diffusion-weighted imaging (detects cytotoxic edema)
  • Susceptibility-weighted imaging/gradient-recalled echo (sensitive for hemorrhage)
  • Post-contrast T1 sequences

Lumbar Puncture and CSF Analysis

Perform lumbar puncture with comprehensive CSF analysis including: 7, 1

  • Cell count with differential (lymphocytic pleocytosis suggests viral/autoimmune causes)
  • Protein and glucose levels
  • Gram stain and bacterial culture
  • Viral PCR panel (HSV, VZV, enterovirus)
  • Cytology to exclude leptomeningeal metastasis
  • Consider autoimmune/paraneoplastic antibody testing if infectious workup negative

Critical caveat: In immunocompromised patients, CSF may be acellular despite active CNS infection, so negative CSF does not exclude infection in this population. 1

Additional Diagnostic Tests

  • EEG: Obtain when distinguishing psychiatric versus organic causes or when subtle seizures suspected (abnormal in >80% of encephalitis cases) 1
  • Blood work: Complete metabolic panel, blood cultures if febrile, malaria testing if travel to endemic areas 1

Differential Diagnosis Priority

Life-Threatening Causes (Rule Out First)

  1. Bacterial meningitis: Requires immediate antibiotics before imaging if high clinical suspicion 1, 4
  2. Encephalitis: Distinguished from meningitis by presence of altered behavior, confusion, seizures, or focal deficits 5, 1
  3. Subarachnoid hemorrhage: Instant peak headache, thunderclap quality 6
  4. Brain tumor/mass lesion: Chronic progressive pattern with signs of raised ICP 4
  5. Intracranial hemorrhage: Detected on CT with 98-99% sensitivity/specificity 5

Immune-Related Causes (If on Checkpoint Inhibitors)

For patients receiving immunotherapy, neurologic adverse events occur in 3.8-12% depending on agent, with headache being the most common mild symptom. 5 However, severe manifestations including aseptic meningitis and encephalitis require:

  • Immediate discontinuation of checkpoint inhibitor for grade 2 or higher symptoms 5
  • Methylprednisolone 1-4 mg/kg depending on severity, with consideration of pulse-dose 1g daily for 3-5 days for grade 3+ toxicity 5
  • IVIG should be strongly considered for severe cases 5

The distinction between aseptic meningitis and encephalitis is critical: Isolated headache suggests meningitis, but addition of confusion, altered behavior, aphasia, or memory loss indicates encephalitis requiring more aggressive treatment including pulse-dose steroids and autoimmune antibody evaluation. 5

Autoimmune/Inflammatory Causes

  • MOGAD (myelin oligodendrocyte glycoprotein antibody-associated disease): Can present as aseptic meningitis mimic with chronic headaches, vomiting, and CSF pleocytosis despite negative infectious workup 3
  • Lupus-related aseptic meningitis: Requires rigorous exclusion of infection before diagnosis, especially in immunosuppressed patients 7
  • Neurocysticercosis: Consider in endemic areas; subarachnoid cysts cause eosinophilic meningitis with severe headache, meningism, and altered consciousness 5

Parasitic Causes (Travel History Dependent)

  • Angiostrongylus cantonensis: Severe acute headache with marked peripheral eosinophilia in travelers to SE Asia; treat with corticosteroids (prednisolone 60mg daily for 14 days) 5
  • Cerebral malaria: Obtain three thick/thin blood films; treat with quinine/artemether if suspected 1

Management Based on Etiology

Infectious Meningitis/Encephalitis

Immediate empiric treatment with appropriate antimicrobials/antivirals before diagnostic confirmation if high clinical suspicion, as delays worsen morbidity and mortality. 1 Patients require management in neurological wards, HDU, or ICU depending on severity. 1

Primary Headache (After Exclusion of Secondary Causes)

Most presentations are ultimately benign—viral illness or primary headache/migraine. 2, 9 However, never diagnose primary headache without adequate exclusion of secondary causes, particularly in first-ever severe presentations. 4, 9

For confirmed migraine in emergency settings: 5, 9

  • NSAIDs or combination analgesics with caffeine for mild-moderate attacks
  • Triptans or DHE for moderate-severe attacks
  • Antiemetics (metoclopramide, prochlorperazine) for nausea
  • Avoid opioids due to poor effectiveness and rebound risk 9

Disposition and Follow-Up

  • Never discharge without definite or suspected diagnosis 1
  • Arrange outpatient neurology follow-up and rehabilitation assessment, as sequelae may not be immediately apparent 1
  • Lack of headache center referral results in high ED relapse rates 9

Common Pitfalls to Avoid

  • Mistaking behavioral changes for primary psychiatric illness when they represent encephalitis, leading to dangerous delays in treatment 8
  • Assuming negative initial imaging excludes serious pathology: Serial imaging may be necessary, particularly for inflammatory conditions like MOGAD 3
  • Attributing symptoms to immunotherapy without excluding infection: Always rule out infectious causes before diagnosing immune-related adverse events 5, 7
  • Performing lumbar puncture before imaging in patients with focal deficits or altered consciousness: Risk of herniation 1

References

Guideline

Management of Acute Encephalitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Six Year Old With Chronic Headache: An Unexpected Meningitis Mimic.

WMJ : official publication of the State Medical Society of Wisconsin, 2024

Research

Approach to headache in emergency department.

Indian journal of pediatrics, 2012

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Acute Headache Presentations to the Emergency Department: A Statewide Cross-sectional Study.

Academic emergency medicine : official journal of the Society for Academic Emergency Medicine, 2017

Guideline

Neuropsychiatric Systemic Lupus Erythematosus Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Limbic Encephalitis Diagnosis and Management

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

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Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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