What are the best labs to order for a comprehensive thyroid workup?

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Last updated: January 15, 2026View editorial policy

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Best Labs for Thyroid Workup

Order TSH as the initial screening test, followed by free T4 if TSH is abnormal—this two-step approach provides the most cost-effective and accurate assessment of thyroid function in the vast majority of patients. 1, 2

Initial Screening Strategy

  • TSH is the single most sensitive and specific test for detecting primary thyroid dysfunction, with sensitivity of 98% and specificity of 92% 1
  • Order TSH alone for initial screening in patients with suspected thyroid disease or for routine screening in high-risk populations 1, 2
  • TSH values below 0.1 mU/L indicate hyperthyroidism, while values above 6.5 mU/L indicate hypothyroidism 1

Reflex Testing Based on TSH Results

If TSH is Elevated (>4.5 mU/L):

  • Add free T4 to distinguish subclinical hypothyroidism (normal free T4) from overt hypothyroidism (low free T4) 2, 3
  • Measure anti-TPO antibodies to confirm autoimmune etiology, which predicts 4.3% annual progression risk to overt hypothyroidism versus 2.6% in antibody-negative patients 4
  • Free T4 is more reliable than total T4 because it is not affected by thyroid-binding protein abnormalities 5

If TSH is Suppressed (<0.1 mU/L):

  • Measure free T4 and total T3 to confirm hyperthyroidism, as free T3 is often the first hormone elevated in early hyperthyroidism 2, 6
  • If free T4 is normal but TSH remains suppressed, measure free T3 to detect T3 toxicosis 3
  • Consider TRAb (TSH receptor antibodies) to diagnose Graves' disease if hyperthyroidism is confirmed 7

If TSH is Normal (0.45-4.5 mU/L):

  • No additional testing is needed in asymptomatic patients, as normal TSH combined with normal free T4 definitively excludes both overt and subclinical thyroid dysfunction 4
  • In sick hospitalized patients, a normal TSH with normal free T4 suggests the patient has neither hypothyroidism nor thyrotoxicosis 2

Essential Tests for Comprehensive Workup

The complete initial thyroid panel should include:

  • TSH (always first) 1, 2, 3
  • Free T4 (if TSH abnormal) 2, 5, 3
  • Free T3 (if TSH suppressed with normal free T4, or monitoring certain hyperthyroid conditions) 6, 3
  • Anti-TPO antibodies (if TSH elevated, to confirm autoimmune etiology) 4, 7

Special Circumstances Requiring Modified Testing

Suspected Central Hypothyroidism:

  • Measure both TSH and free T4 simultaneously, as TSH cannot be used as a screening test when pituitary or hypothalamic disease is suspected 3
  • A low or inappropriately normal TSH with low free T4 indicates central hypothyroidism 4

Monitoring Thyroid Cancer:

  • Measure serum thyroglobulin (Tg) with anti-Tg antibodies 6-12 months after initial treatment 1
  • Thyroglobulin antibodies can interfere with Tg measurement, making the test unreliable 7

Suspected Medullary Thyroid Cancer:

  • Measure basal serum calcitonin and CEA before surgery in patients with suspicious nodules 1
  • Some guidelines recommend routine calcitonin screening for all thyroid nodules, though this remains controversial in the United States 1

Pregnancy or Planning Pregnancy:

  • TSH and free T4 should be measured, with target TSH <2.5 mIU/L in first trimester 4
  • Levothyroxine requirements increase 25-50% during pregnancy, necessitating more frequent monitoring 4

Critical Pitfalls to Avoid

  • Never rely on total T4 or total T3 alone, as these are affected by thyroid-binding protein abnormalities (TBG excess/deficiency, familial dysalbuminemic hyperthyroxinemia) and will give false results in euthyroid patients 5
  • Do not order free T3 routinely—it adds no diagnostic value in primary hypothyroidism and should be reserved for suspected T3 toxicosis or monitoring specific hyperthyroid conditions 6, 7
  • Avoid testing during acute illness, as nonthyroidal illness can cause transient TSH abnormalities that normalize after recovery; wait 3-6 weeks after illness resolution 4
  • Confirm abnormal results with repeat testing after 3-6 weeks, as 30-60% of elevated TSH values normalize spontaneously 4
  • Be aware of assay interferences—heterophilic antibodies, biotin supplementation, and certain medications can cause spurious results 7
  • Never treat based on a single abnormal TSH value without confirmation and clinical correlation 4

Algorithm for Test Selection

  1. Start with TSH alone for screening 1, 2, 3
  2. If TSH >4.5 mU/L: Add free T4 and anti-TPO antibodies 4, 2
  3. If TSH <0.1 mU/L: Add free T4 and free T3 2, 6, 3
  4. If TSH normal (0.45-4.5 mU/L): Stop—no further testing needed unless central hypothyroidism suspected 4, 2
  5. If central hypothyroidism suspected: Order TSH and free T4 simultaneously 3

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Initial Treatment for Elevated TSH

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Research

Rational use of thyroid function tests.

Critical reviews in clinical laboratory sciences, 1997

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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