What is the preferred initial imaging modality, Positron Emission Tomography (PET) Computed Tomography (CT) or Magnetic Resonance Imaging (MRI), for a child with Pyrexia of Unknown Origin (PUO)?

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Last updated: January 19, 2026View editorial policy

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PET-CT vs MRI in Pediatric Pyrexia of Unknown Origin

FDG-PET/CT is the preferred advanced imaging modality for children with pyrexia of unknown origin when initial evaluation fails to identify the cause, demonstrating superior diagnostic performance with 85.5% sensitivity and high clinical impact in 79% of cases, while whole-body MRI has insufficient evidence to support routine use in this population. 1

Evidence-Based Imaging Algorithm

Initial Approach: Clinical Assessment First

  • Begin with chest radiography only if pulmonary symptoms are present or concern exists for atypical bacterial infection, tuberculosis, or oncologic processes 1
  • For febrile infants >3 months without respiratory signs, medical management without imaging is usually appropriate 1

When Advanced Imaging is Indicated

FDG-PET/CT should be considered as the second-line imaging modality when:

  • Initial clinical evaluation and basic laboratory testing fail to identify fever source after 72-96 hours 2
  • The child has undergone prior diagnostic studies (radiography, ultrasound) without definitive diagnosis 1

Performance Characteristics of FDG-PET/CT in Pediatric PUO

The 2025 ACR Appropriateness Criteria provides the strongest evidence for FDG-PET/CT:

  • Diagnostic yield: Identifies fever source in 48% of pediatric patients 1
  • Sensitivity: 85.5% with specificity of 79.2% 1
  • Clinical impact: High in 79% of cases, prompting specialist referrals or changes to antimicrobial/antifungal therapy 1
  • Common diagnoses identified: Endocarditis (11%), systemic juvenile idiopathic arthritis (5%), inflammatory bowel disease (5%) 1

In immunosuppressed pediatric patients specifically, FDG-PET/CT correctly identified the fever source in 88% of cases 1

MRI Performance in Pediatric PUO: Limited Evidence

Whole-body MRI has insufficient evidence to support routine use in pediatric PUO evaluation:

  • No relevant literature supports MRI chest (with or without contrast) for initial PUO evaluation 1
  • Whole-body MRI studies in children are rare, with only small case series available 1
  • In one retrospective study of 3 pediatric PUO patients, whole-body MRI identified septic arthritis in one case and pneumonia with pleural effusion in another 1
  • A larger series used whole-body MRI in 61 pediatric PUO patients primarily to rule out oncologic disease and occult abscesses, but diagnostic performance metrics were not reported 1

Special Population: Neutropenic Fever

For immunosuppressed and neutropenic children, the Children's Oncology Group specifically recommends FDG-PET/CT due to high sensitivity and specificity for infections in chest, abdomen, and pelvis 1

Critical Timing Considerations

  • Perform FDG-PET/CT within 3 days of initiating oral glucocorticoid therapy if steroids are necessary, as early steroid use suppresses inflammatory activity and leads to false-negative results 2, 3
  • Most children in successful diagnostic series had undergone prior basic imaging (radiography, ultrasound) before PET/CT 1

Common Pitfalls to Avoid

  • Do not order whole-body MRI as first-line advanced imaging in pediatric PUO—the evidence base is insufficient and diagnostic yield is poorly characterized 1
  • Avoid empiric imaging without clinical indication in well-appearing febrile children >3 months without respiratory signs 1
  • Do not delay FDG-PET/CT if steroids are clinically necessary—perform imaging within 3 days of steroid initiation 2
  • Remember radiation exposure concerns in children, but recognize that FDG-PET/CT's high diagnostic yield (48% identification rate) and clinical impact (79% of cases) justify its use when indicated 1

FDG-PET/MRI: Emerging but Not Ready

While FDG-PET/MRI has been suggested as potentially useful, there is insufficient data to support its use in initial pediatric PUO evaluation, and further prospective studies are needed 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Diagnostic Approach to Pyrexia of Unknown Origin (PUO)

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Diagnostic Approach to Pyrexia of Unknown Origin

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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