What syndromes are associated with both cognitive or developmental delay and hypertelorism?

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Syndromes Associated with Cognitive Delays and Hypertelorism

The most common syndromes presenting with both cognitive/developmental delay and hypertelorism are Noonan syndrome, 22q11.2 deletion syndrome (DiGeorge/Shprintzen), cardio-facio-cutaneous (CFC) syndrome, ICF syndrome, and CHARGE association, with Noonan syndrome being the most prevalent at 1:1,000-2,500 live births. 1

Primary Syndromes to Consider

Noonan Syndrome

  • Hypertelorism with down-slanting palpebral fissures and ptosis are hallmark facial features, occurring in 68% and 56% of patients respectively 2
  • Cognitive impairment ranges from mild intellectual deficit to borderline intelligence, with learning disabilities being common 1, 3
  • Caused by PTPN11 gene mutations in >50% of cases, with additional mutations in SOS1, RAF1, or KRAS genes 1
  • Incidence is 1:1,000-2,500 live births, making it the most common syndromal cause of congenital heart disease after Down syndrome 3, 4
  • Associated features include short stature, webbed neck, pulmonary stenosis, and hypertrophic cardiomyopathy 1

22q11.2 Deletion Syndrome (DiGeorge/Shprintzen/CATCH-22)

  • Characterized by partial deletion of chromosome 22q11.2, affecting approximately 1:2,000-4,000 live births 1, 5
  • Cognitive profile shows borderline intellectual functioning (IQ 70-84) in the majority, with one-third having mild to moderate intellectual disability 5
  • Facial features include malar flatness, upslanting palpebral fissures, and hooded eyelids, though hypertelorism is less prominent than in other syndromes 1
  • Motor delays, speech/language deficits, and learning difficulties are commonly observed from infancy onward 5
  • Associated with velopharyngeal incompetence, congenital heart disease (particularly conotruncal anomalies), and immunodeficiency 1, 6

Cardio-Facio-Cutaneous (CFC) Syndrome

  • Hypertelorism, downslanting palpebral fissures, ptosis, and epicanthal folds are characteristic ocular features 1
  • Marked cognitive delay and intellectual disability are more severe and frequent compared to Noonan syndrome 1
  • Distinctive features include coarse facial features, sparse curly/friable hair, and follicular hyperkeratosis (ulerythema ophryogenes) 1
  • Caused by mutations in BRAF, MEK1, MEK2, or KRAS genes 1
  • Prenatal findings include increased nuchal lucency, cystic hygroma, and polyhydramnios in 77% of cases 1

ICF Syndrome (Immunodeficiency, Centromeric Instability, Facial Anomalies)

  • Hypertelorism, epicanthal folds, low-set ears, and flat nasal bridge occur in approximately 90% of patients 1
  • Developmental delay or cognitive impairment is present in about two-thirds of patients 1
  • Hypogammaglobulinemia occurs in most patients (39/44 in one series), with frequent bacterial respiratory infections 1
  • Caused by mutations in DNMT3B gene (ICF1) in 60% of cases or ZBTB24 gene (ICF2) 1
  • Growth retardation occurs in approximately half of patients 1

CHARGE Association

  • Growth and developmental delay are core features, along with coloboma of the eye, heart defects, and choanal atresia 1
  • Caused by autosomal dominant mutations in the CHD7 gene 1
  • The acronym CHARGE represents: Coloboma, Heart defects, Atresia choanae, Growth/developmental delay, Genital abnormalities, and Ear abnormalities 1

Additional Syndromes with Overlapping Features

Noonan Syndrome with Multiple Lentigines (formerly LEOPARD syndrome)

  • Shares hypertelorism, short stature, pulmonary stenosis, and hypertrophic cardiomyopathy with classic Noonan syndrome 1
  • Some patients have cognitive delay, though less frequently than in CFC syndrome 1
  • Distinguished by multiple skin lentigines, frequent sensorineural deafness, and cardiac conduction abnormalities 1

Baraitser-Winter Syndrome

  • Features hypertelorism, ptosis, short stature, and cognitive delay 1
  • Distinguished from CFC by iris coloboma, lissencephaly, pachygyria, and aortic valve anomalies 1

Nijmegen Breakage Syndrome (NBS)

  • Characterized by microcephaly, characteristic facies, growth retardation, and cognitive impairment 1
  • Caused by mutations in NBS1 gene, with prominent immunodeficiency as a distinguishing feature 1
  • Part of the chromosomal repair disorders with increased cancer predisposition 1

Clinical Approach and Diagnostic Pitfalls

Key Distinguishing Features

  • Noonan syndrome typically has less severe cognitive impairment and fewer cutaneous features compared to CFC syndrome 1
  • CFC syndrome shows more pronounced follicular hyperkeratosis, sparse eyebrows, and marked cognitive delay 1
  • ICF syndrome is distinguished by prominent immunodeficiency with hypogammaglobulinemia and recurrent infections 1
  • 22q11.2 deletion syndrome has characteristic cardiac (conotruncal) and immunologic (thymic hypoplasia) features 1

Important Caveats

  • Facial features in many of these syndromes become less pronounced with age, making early recognition critical 1
  • Genetic testing is essential for definitive diagnosis, as clinical overlap between RASopathies (Noonan, CFC, Costello syndromes) is substantial 1
  • Chromosome microarray analysis should be considered if initial gene-specific testing is negative 1
  • Whole exome or genome sequencing may be warranted when standard genetic testing is unrevealing 1

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Noonan syndrome.

Orphanet journal of rare diseases, 2007

Research

Developmental trajectories in 22q11.2 deletion.

American journal of medical genetics. Part C, Seminars in medical genetics, 2015

Guideline

Differential Diagnosis of Facial Asymmetry with Speech Delay

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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