What are the common infectious causes of jejunal colitis and the recommended management?

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Infectious Causes of Jejunal Colitis

Critical Clarification

The term "jejunal colitis" is anatomically contradictory—the jejunum is small bowel, while colitis refers to large bowel (colon) inflammation. I will address infectious causes of jejunal enteritis (small bowel inflammation) and infectious colitis (large bowel inflammation) separately, as the pathogens and clinical presentations differ significantly.


Infectious Jejunal Enteritis (Small Bowel)

Primary Pathogens

Parasitic infections dominate jejunal disease:

  • Giardia lamblia causes non-inflammatory diarrhea affecting the proximal small bowel, diagnosed by fluorescence or EIA testing 1
  • Cryptosporidium identified through acid-fast stains, particularly in immunocompromised patients 1
  • Cyclospora, Isospora detected via acid-fast staining 1
  • Microsporidia requires special chromotrope stains 1

Bacterial causes are less common in isolated jejunal disease:

  • Vibrio species should be considered with seafood or seacoast exposure 1
  • Yersinia enterocolitica when persistent abdominal pain and fever are present, requiring cold enrichment culture 1

Diagnostic Approach for Jejunal Disease

Order parasitic studies when:

  • Travel to endemic areas 1
  • Non-inflammatory diarrhea pattern (watery without blood/pus) 2
  • Immunocompromised status 1

Infectious Colitis (Large Bowel)

Common Bacterial Pathogens

The most frequent invasive bacterial causes include:

  • Campylobacter jejuni 2, 3
  • Salmonella species 2, 3
  • Shigella species 2, 3
  • Shiga toxin-producing E. coli (STEC) O157:H7 2
  • Clostridioides difficile 4, 5
  • Yersinia enterocolitica 3

Less common bacterial causes:

  • Neisseria gonorrhoeae, Chlamydia trachomatis, Treponema pallidum in men who have sex with men with proctitis 1, 6

Viral Pathogens

  • Cytomegalovirus (especially immunocompromised) 6
  • Rotavirus, adenovirus, norovirus 6
  • Herpesvirus (distal proctitis in homosexual men) 1

Parasitic Causes

  • Entamoeba histolytica 6
  • Balantidium coli 6

Recommended Diagnostic Algorithm

Initial Stool Testing (All Patients)

Obtain these studies immediately:

  • Standard bacterial culture or PCR panel for Shigella, Salmonella, Campylobacter 4
  • C. difficile toxin assay is mandatory for every case, especially with recent antibiotic exposure, immunosuppression, or corticosteroid use 4, 5
  • Shiga toxin testing when STEC suspected (low-grade or absent fever with bloody diarrhea) 4, 2

Inflammatory Markers

Document colonic inflammation:

  • Fecal lactoferrin or microscopy for leukocytes indicates invasive colitis 1, 2
  • Complete blood count may show leukocytosis or leukemoid reaction (especially Shigella) 4
  • Serum CRP and ESR typically elevated but cannot distinguish infection from IBD 4

Specialized Testing Based on Epidemiology

Order parasitic studies when:

  • Travel history to endemic regions 1, 4
  • Fluorescence and EIA for Giardia and Cryptosporidium 1
  • Acid-fast stains for Cryptosporidium, Cyclospora, Isospora 1
  • Ova and parasite examination 4

Consider additional cultures:

  • Vibrio species with seafood/seacoast exposure 1
  • Yersinia with persistent abdominal pain and fever (requires cold enrichment) 1

Endoscopic Evaluation

Perform sigmoidoscopy or colonoscopy with biopsies when:

  • Diagnosis remains uncertain after stool studies 4
  • Need to differentiate infectious colitis from IBD 4
  • Infectious colitis shows preserved crypt architecture with acute inflammatory infiltrates 4
  • IBD demonstrates crypt architectural distortion, basal plasmacytosis, and chronic inflammation 4

Management Principles

Antimicrobial Therapy

Critical treatment decisions:

  • Never give antibiotics for STEC infection—this increases hemolytic uremic syndrome risk 4, 5, 2
  • For empiric treatment of febrile dysenteric diarrhea, treat adults with azithromycin 1000mg single dose targeting Shigella, Salmonella, Campylobacter 2
  • C. difficile first-line therapy: oral vancomycin 125mg QID × 10 days or fidaxomicin 200mg BID × 10 days 5
  • Antibiotics for invasive bacterial colitis should be reserved for severe infections, immunocompromised patients, prosthetic devices/valvular disease, elderly (>65 years), or significant comorbidities 5

Supportive Care

All patients require:

  • Aggressive IV fluid resuscitation for volume depletion 5
  • Electrolyte replacement (potassium, magnesium) as needed 5
  • Avoid antidiarrheal agents—they can precipitate toxic megacolon 5

Critical Pitfalls to Avoid

  • Do not use metronidazole as first-line for C. difficile—vancomycin or fidaxomicin are superior 5
  • Do not continue the inciting antibiotic in C. difficile infection—this dramatically increases recurrence 5
  • Early IBD can mimic infection by preserving crypt architecture; repeat endoscopy after 4 weeks if diagnostic doubt persists 4
  • Reassess at 3 days if no improvement; reconsider diagnosis and retest for C. difficile if not already done 5
  • Persistent symptoms ≥14 days warrant evaluation for IBD or post-infectious complications 4

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Approach to the patient with infectious colitis.

Current opinion in gastroenterology, 2012

Research

Bacterial colitis.

Clinics in colon and rectal surgery, 2007

Guideline

Evidence‑Based Diagnosis and Management of Infectious Colitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

Treatment of Infectious Colitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

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Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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