What is homocysteine?

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What is Homocysteine

Homocysteine is a sulfur-containing amino acid produced as an intermediate metabolite during the breakdown of methionine, an essential amino acid, and its metabolism requires vitamins B6, B12, and folic acid as essential cofactors. 1

Biochemical Origin and Metabolism

Homocysteine is not obtained from dietary sources but is synthesized endogenously through a specific metabolic pathway 2, 3:

  • Production pathway: Homocysteine is generated when S-adenosyl-methionine (SAM)—the body's universal methyl donor—undergoes methylation reactions, producing S-adenosyl-homocysteine (SAH), which is then hydrolyzed to homocysteine 1

  • Remethylation pathway: Under conditions of methionine deficiency, homocysteine is converted back to methionine by methionine synthase (MS), which requires vitamin B12 as a cofactor and 5-methyltetrahydrofolate (5-MTHF) as a substrate 1

  • Transsulfuration pathway: When methionine is abundant, homocysteine is metabolized to cystathionine and then cysteine via cystathionine β-synthase (CBS), which requires vitamin B6 as an essential cofactor 1

  • Renal clearance: A portion of homocysteine is eliminated through the kidneys 4, 5

Normal Reference Values

Normal plasma homocysteine levels are widely accepted as <15 μmol/L, though optimal levels in healthy adults with good B-vitamin status are <12 μmol/L. 1

The classification system for elevated levels 1:

  • Moderate hyperhomocysteinemia: 15-30 μmol/L
  • Intermediate hyperhomocysteinemia: 30-100 μmol/L
  • Severe hyperhomocysteinemia: >100 μmol/L

Adults without folic acid fortification typically have upper reference limits of 15-20 μmol/L 1

Causes of Elevated Homocysteine

The three primary nutritional causes are deficiencies in folic acid, vitamin B12, and vitamin B6, as these vitamins serve as essential cofactors in homocysteine metabolism. 2, 3, 5

Additional causes include 1, 6, 3:

  • Genetic defects: Mutations in cystathionine β-synthase (CBS) or methylenetetrahydrofolate reductase (MTHFR), particularly the C677T variant
  • Chronic renal failure: Decreased renal clearance leads to accumulation 1, 4
  • Hypothyroidism 6
  • Certain medications 6

Clinical Significance

Elevated homocysteine is associated with a 2- to 3-fold increased risk for atherosclerotic vascular disease, including stroke, coronary artery disease, and venous thromboembolism. 1, 6

The cardiovascular risk is quantifiable 1, 6:

  • Each 5 μmol/L increase in homocysteine raises stroke risk by 59% (95% CI, 29-96%)
  • Each 3 μmol/L decrease reduces stroke risk by 24% (95% CI, 15-33%)
  • A 5 μmol/L increment confers coronary artery disease risk equivalent to a 20 mg/dL increase in cholesterol

Beyond cardiovascular disease, elevated homocysteine is associated with neurodegenerative disorders (including Alzheimer's disease and vascular dementia), pregnancy complications, osteoporosis, and venous thrombosis 2, 3, 5

Pathophysiological Mechanisms

Homocysteine causes vascular damage through multiple mechanisms, primarily oxidative stress and endothelial dysfunction. 1

Key mechanisms include 1:

  • Oxidative stress: Self-oxidation of homocysteine to homocystine generates reactive oxygen species (ROS), and homocysteine induces NADPH oxidase activity, increasing superoxide radical production
  • Endothelial dysfunction: Uncoupled endothelial nitric oxide synthase (eNOS) becomes a source of superoxide radicals instead of nitric oxide, leading to low NO bioavailability
  • Inflammatory activation: The pro-oxidative state activates nuclear factor-kappa B (NF-κB), triggering expression of vascular cell adhesion molecule-1 and monocyte chemoattractant protein-1, promoting atherogenesis 1

Critical Testing Considerations

Blood samples for homocysteine measurement must be placed on ice immediately after collection and centrifuged with plasma separation within 30 minutes to prevent falsely elevated results from erythrocyte release. 7, 6

The patient must fast for at least 8 hours before testing 7, 6

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Genetics of homocysteine metabolism and associated disorders.

Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologicas, 2010

Research

Homocysteinemia and vascular disease in end-stage renal disease.

Kidney international. Supplement, 1996

Research

Homocysteine and Hyperhomocysteinaemia.

Current medicinal chemistry, 2019

Guideline

Hyperhomocysteinemia and Cardiovascular Risk

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Management of Hyperhomocysteinemia

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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