What are the 5 most common causes of neonatal constipation?

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The 5 Most Common Causes of Neonatal Constipation

The five most common causes of neonatal constipation are intestinal dysmotility, Hirschsprung disease, anal stenosis/atresia, intestinal malrotation, and functional megacolon. 1

1. Intestinal Dysmotility

Intestinal dysmotility is the most common cause of constipation in neonates. It is characterized by:

  • Abnormal intestinal muscle contractions
  • Often related to immaturity of the gastrointestinal tract
  • May be exacerbated by feeding difficulties common in neonates
  • Can be associated with other conditions like gastroesophageal reflux

Intestinal dysmotility-related constipation is often seen in children with certain syndromes, such as cardio-facio-cutaneous syndrome, where it can remain a lifelong problem 1.

2. Hirschsprung Disease (Congenital Aganglionic Megacolon)

Hirschsprung disease is a serious cause of neonatal constipation characterized by:

  • Absence of ganglion cells in the submucosal and myenteric plexuses
  • Typically presents with failure to pass meconium within 48 hours of birth
  • Rectal examination reveals an empty, tight rectum (unlike functional constipation)
  • May present with abdominal distention and bilious vomiting
  • Without treatment, mortality approaches 50% by one year of age 2

Diagnosis is confirmed by rectal biopsy, and treatment is surgical 2, 3.

3. Anal Stenosis or Atresia

Anal abnormalities are important structural causes of neonatal constipation:

  • May be apparent on physical examination
  • Can range from complete atresia to stenosis
  • Often associated with other congenital anomalies
  • Requires surgical correction

Gastroenterologists can differentiate constipation caused by anal stenosis from other conditions 1.

4. Intestinal Malrotation

Malrotation can cause constipation in neonates due to:

  • Abnormal positioning of intestines during development
  • Potential for volvulus (twisting of the intestine)
  • May present with bilious vomiting and abdominal distention
  • Can be diagnosed with upper GI series 1

5. Functional Megacolon

Functional megacolon differs from Hirschsprung disease:

  • Dilated colon with normal ganglion cells
  • May be related to dietary factors or dehydration
  • Often improves with age and proper management
  • Less severe than Hirschsprung disease but can cause significant constipation

Important Clinical Considerations

When evaluating neonatal constipation, consider:

  • Timing of onset: Constipation present from birth or beginning in the neonatal period is most likely to be congenital in origin 4
  • Associated symptoms: Failure to thrive and gross abdominal distention suggest Hirschsprung disease 4
  • Physical examination: Rectal examination typically reveals a distended rectum full of stool in functional constipation, while in Hirschsprung disease, the rectum is usually empty and tight 4

Less Common Causes to Consider

Other potential causes of neonatal constipation include:

  • Hypothyroidism
  • Cystic fibrosis
  • Metabolic disorders
  • Multiple intestinal atresias (rare but reported in combination with Hirschsprung disease) 5
  • Disorders associated with specific genetic syndromes like 22q11.2 deletion syndrome 1

Early diagnosis and appropriate management of neonatal constipation are essential to prevent complications and improve outcomes. Referral to a pediatric gastroenterologist is recommended for persistent constipation or when organic causes are suspected.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Constipation in children.

American family physician, 1996

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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