Diagnostic Testing for Acute Diarrhea
For most cases of uncomplicated acute diarrhea, no diagnostic testing is recommended as the condition is typically self-limited and resolves without specific intervention. 1
When to Test
Testing should be performed in specific clinical scenarios:
- Severe illness: Fever, bloody/mucoid stools, severe abdominal cramping, or signs of sepsis
- High-risk patients: Immunocompromised, elderly, or those with underlying medical conditions
- Prolonged symptoms: Diarrhea lasting >14 days
- Specific exposures: Healthcare-associated diarrhea, travel history, or outbreak settings
Optimal Testing Approach
First-line Testing
- Optimal specimen: A diarrheal stool sample that takes the shape of the container 1
- For bacterial pathogens: Test for Salmonella, Shigella, Campylobacter, Yersinia, C. difficile, and STEC in symptomatic hosts 1
- Testing modality: Culture-independent diagnostic tests (CIDTs) such as multiplex PCR panels offer rapid results with higher sensitivity than traditional culture 2, 3
Special Circumstances Testing
For large-volume "rice water" stools or seafood exposure:
For persistent abdominal pain, especially in school-aged children:
- Test for Yersinia enterocolitica 1
For healthcare-associated diarrhea (>3 days after hospitalization):
For immunocompromised patients, especially those with AIDS:
- Broader testing for Cryptosporidium, Cyclospora, Cystoisospora, microsporidia, Mycobacterium avium complex, and cytomegalovirus 1
For travelers with diarrhea lasting >14 days:
- Evaluate for intestinal parasitic infections 1
For suspected enteric fever or bacteremia:
- Perform blood cultures in addition to stool testing 1
Tests to Avoid
- Fecal leukocyte examination and stool lactoferrin detection should not be used to establish the cause of acute infectious diarrhea (strong recommendation) 1
- Serologic tests are not recommended to establish an etiology of infectious diarrhea or enteric fever 1
- Routine stool cultures in hospitalized patients after 3 days of admission have very low yield 2
Interpretation Considerations
- Molecular tests detect DNA, not necessarily viable organisms, which can lead to overtreatment if results are misinterpreted 1, 2
- A positive test result may not always indicate the causative agent, as asymptomatic carriage of some pathogens is possible 3
- Multiple pathogens may be detected in up to 21% of cases, complicating interpretation 3
Follow-up Testing
- Follow-up testing is generally not recommended for case management after resolution of symptoms 1
- For patients who fail to improve:
Pitfalls to Avoid
- Indiscriminate testing is costly and inefficient; selective testing based on clinical presentation improves diagnostic yield 4
- Overreliance on traditional stool culture alone may miss important pathogens; consider multiplex molecular testing for comprehensive coverage 3, 5
- Failing to consider C. difficile in community-acquired diarrhea (up to 60% of C. difficile cases may be community-acquired) 3
- Misinterpreting molecular test results without considering clinical context can lead to unnecessary treatment 2
By following this targeted approach to diagnostic testing for acute diarrhea, clinicians can improve diagnostic yield while reducing unnecessary testing and inappropriate antimicrobial use.