What is urine cytology?

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What is Urine Cytology

Urine cytology is a laboratory test that examines exfoliated cells from the urinary tract (obtained from voided urine, bladder washings, or brushings) under a microscope to detect malignant or atypical urothelial cells, primarily used to identify high-grade bladder cancer and carcinoma in situ. 1

Purpose and Clinical Application

  • Primary target: Urothelial (transitional cell) carcinomas, which are the most commonly detected malignancies in patients with microscopic hematuria 1
  • Best performance: Detects almost all high-grade urothelial neoplasms with sensitivity ranging from 52.2% to 87.08% for high-grade tumors 2, 3
  • Adjunct to cystoscopy: Particularly useful for detecting carcinoma in situ (CIS), which may be missed on visual inspection alone 1
  • Surveillance role: Essential for monitoring all patients with urothelial neoplasms and can decrease the frequency of cystoscopy when used consistently 4

Specimen Collection Methods

The International Consultation on Urologic Disease (ICUD) recommends documenting both the anatomic site (bladder, urethra, ureter, or renal pelvis) and collection technique in the diagnostic report 1:

  • Voided urine: Most useful type for routine diagnostic interpretation; freshly voided, randomly collected specimens are preferred 4
  • Bladder washings/barbotage: May yield more and better preserved cells, but no significant difference in sensitivity or specificity compared to voided specimens 3
  • Brushings: Alternative collection method for targeted sampling 1

Important caveat: Patients should not be catheterized solely to obtain diagnostic material 4

Diagnostic Performance Characteristics

Sensitivity and Specificity

  • Overall sensitivity: 38.0% to 57.7% 5, 3
  • High-grade tumors: Sensitivity improves to 78.3-87.08% after multiple samples 5, 2
  • Specificity: 94.9% to 98.3% 5, 3
  • Positive predictive value: 90.6% 3
  • Negative predictive value: 78.6% to 98.7% 5, 3

Likelihood Ratios

  • Positive likelihood ratio: 7.67 (moderate ability to increase post-test probability) 5
  • Negative likelihood ratio: 0.35 (moderate ability to decrease post-test probability) 5

Reporting System and Diagnostic Categories

The ICUD recommends a standardized reporting format modeled after the Papanicolaou Society guidelines, similar to the Bethesda System for cervical cytology 1:

Diagnostic Categories for Epithelial Cell Abnormalities:

  • Atypical urothelial cells of undetermined significance: Follow with repeat urine cytology 1
  • Atypical urothelial cells, cannot rule out high-grade carcinoma or atypical urothelial cells, favor neoplasm: Require endoscopic evaluation 1
  • Low-grade urothelial carcinoma: Lacks specific criteria; most cases included in atypical category 1
  • High-grade urothelial carcinoma: Well-defined malignant features 1

Note: The Paris System for Reporting Urinary Cytopathology, proposed by the International Academy of Cytology in 2013, provides updated consensus guidelines 1

Clinical Indications

When to Order Urine Cytology:

  • Risk-based approach: Recommended in all patients with risk factors for transitional cell carcinoma (smoking, occupational exposures, age >40, pelvic radiation) 1
  • With hematuria: Can be useful adjunct to cystoscopy, especially for carcinoma in situ 1
  • Surveillance: Monitoring patients with known urothelial neoplasms 4, 6
  • Positive cytology with normal cystoscopy: Requires evaluation of upper tracts and prostate in men; ureteroscopy may be considered 1

AUA Guideline Recommendations:

  • Strong recommendation (Grade C evidence): Do NOT routinely use urine cytology to decide whether to perform cystoscopy in low/negligible-risk or high-risk patients 5
  • Intermediate-risk patients: Cytology may assist in informing cystoscopy decisions; negative cytology reduces post-test probability to 0.4% 5

Technical Considerations

Specimen Processing:

  • Preservation: Refrigeration required to prevent bacterial growth and cellular degeneration; alcohol preservation unnecessary unless prolonged storage needed 4
  • Processing methods: Membrane filtration displays cytologic details best; computer-programmed cytocentrifuge most popular 4
  • Staining: Papanicolaou staining optimal for recognizing cytologic details; Romanovsky dyes less desirable 4

Diagnostic Criteria:

  • Nuclear:cytoplasmic ratio: Cells with ratios of 1:2 or less should not be interpreted as malignant regardless of nuclear anaplasia 4
  • Papillary aggregation: Not a reliable feature of low-grade neoplasia 4

Limitations and Pitfalls

  • Low sensitivity for low-grade tumors: Cytologic interpretation of low-grade transitional cell neoplasia requires expertise; these cells lack many features of malignancy 4, 6
  • Cannot replace cystoscopy: None of the currently available urinary markers can replace cystoscopy but are helpful for specific diagnostic problems 3
  • Treatment effects: Alkylating agents (Cytoxan, thio-TEPA, mitomycin C) produce characteristic but nonspecific changes that rarely mimic carcinoma 4
  • Differential diagnosis: Reactive/regenerative/reparative changes from urinary stones can almost always be distinguished from neoplasia using appropriate criteria 4

Adjunct Technologies

  • FDA-approved biomarkers: Fluorescence in situ hybridization (FISH) or nuclear matrix protein 22 may be considered for monitoring recurrence 1
  • Flow cytometry and image analysis: Used in selected centers; routine use awaits further refinements 4

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

The role of urinary cytology for detection of bladder cancer.

European journal of surgical oncology : the journal of the European Society of Surgical Oncology and the British Association of Surgical Oncology, 2005

Guideline

Diagnostic Approaches for Microhematuria

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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