What are the baseline labs required for starting Pre-Exposure Prophylaxis (PrEP)?

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Last updated: November 7, 2025View editorial policy

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Baseline Laboratory Testing for Starting PrEP

Before initiating PrEP, perform HIV testing with a combined HIV antibody/antigen test (or HIV RNA if acute infection suspected), and PrEP can be started the same day if negative without waiting for additional safety labs. 1

Essential Baseline Tests

HIV Testing (Most Critical)

  • Combined HIV antibody and antigen test (4th generation) is the primary screening test 1
  • If performed within 7 days of the visit and negative with no symptoms of acute HIV, PrEP can be initiated same-day 1
  • If test unavailable, perform rapid point-of-care HIV test at the visit, but also send laboratory-based antibody/antigen test 1
  • Add HIV RNA testing if clinical suspicion of acute HIV infection exists—withhold PrEP until results available 1

Renal Function Assessment

  • Serum creatinine with calculated creatinine clearance (CrCl) should be obtained at baseline 1
  • However, do not delay PrEP initiation while waiting for creatinine results 1
  • Patients with CrCl 30-60 mL/min who are MSM may preferentially receive tenofovir alafenamide/emtricitabine if they have osteopenia/osteoporosis risk 1

Additional Baseline Testing (Obtain but Don't Delay)

  • Hepatitis B surface antigen 1
  • STI screening: gonorrhea and chlamydia nucleic acid amplification testing (genital and extragenital sites based on exposure), plus syphilis serology 1
  • Hepatitis C antibody 1
  • Pregnancy test (if applicable) 1

Critical Clinical Approach

The key principle is that PrEP should NOT be delayed waiting for any test results except HIV testing. 1 The primary goal of baseline testing is preventing PrEP administration in persons with undiagnosed HIV infection 1.

Same-Day PrEP Initiation Algorithm

  1. Perform rapid HIV test at visit (if combined antibody/antigen test not available within 7 days) 1
  2. If rapid test negative and no symptoms of acute HIV: start PrEP immediately 1
  3. Send laboratory-based combined antibody/antigen test simultaneously 1
  4. Order creatinine, hepatitis B surface antigen, STI panel, and hepatitis C antibody—but prescribe PrEP without waiting 1
  5. Follow up quickly on results to ensure safety 1

When to Withhold PrEP

  • Any symptoms suggestive of acute HIV infection (fever, rash, lymphadenopathy, pharyngitis)—obtain HIV RNA and withhold PrEP pending results 1
  • Positive or indeterminate HIV screening test 1

Important Caveats

Renal Monitoring Considerations

  • Older patients (≥50 years) and those with baseline CrCl <90 mL/min have substantially higher risk of renal impairment on tenofovir disoproxil fumarate 2
  • Baseline renal dysfunction increases risk 28-fold for developing renal impairment during PrEP 2
  • Consider tenofovir alafenamide formulation for MSM with pre-existing bone or renal concerns 1, 3

Acute HIV Infection Risk

  • PrEP initiated during undiagnosed acute HIV infection can lead to drug resistance (typically M184V/I mutation) 1, 4
  • Primary HIV infection in PrEP users presents with lower viral loads and fewer symptoms, complicating diagnosis 4
  • HIV RNA testing is particularly important if recent ARV exposure or symptoms present 1, 4

Recent Exposure Scenario

  • If high-risk exposure occurred within 72 hours: start 3-drug PEP regimen first, then transition to 2-drug PrEP after 28 days 1
  • Perform combined antibody/antigen test plus HIV RNA at PEP conclusion before transitioning to PrEP 1

Prescribe no more than 30 days initially, then 90-day supplies thereafter, with follow-up visit at 1 month for repeat HIV testing. 1

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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