What is the treatment for autoimmune encephalitis?

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Last updated: December 10, 2025View editorial policy

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Treatment of Autoimmune Encephalitis

Start high-dose intravenous corticosteroids immediately once infection is ruled out, with methylprednisolone 1-2 mg/kg/day or pulse dosing at 1g daily for 3-5 days as the first-line treatment for autoimmune encephalitis. 1, 2

Initial Treatment Strategy

First-Line Immunotherapy Options

The cornerstone of acute management involves three primary modalities that should be initiated promptly once cerebrospinal fluid excludes infection and primary CNS lymphoma or neurosarcoidosis are not considerations 3, 1:

High-dose corticosteroids are the most commonly used first-line therapy 2:

  • Standard dosing: intravenous methylprednisolone 1-2 mg/kg/day 1, 2
  • Pulse dosing for severe cases: 1g daily for 3-5 days 1, 2

IVIG should be used instead of steroids in specific clinical scenarios 3, 1:

  • Patients who are agitated or combative 3, 1
  • Bleeding disorders or coagulopathy present 3, 1
  • Difficulty with central line placement 3
  • Contraindications to corticosteroids 1
  • Dosing: 0.4 g/kg/day for 5 days (total 2 g/kg) 3, 2

PLEX should be chosen as first-line when 3, 1:

  • Severe hyponatremia is present 3, 1
  • High thromboembolic risk exists 3, 1
  • Associated brain or spinal demyelination 3, 1
  • Protocol: 5-10 sessions performed every other day 3, 2

Combination Therapy for Severe Presentations

For severe initial presentations, combine steroids plus IVIG or steroids plus PLEX from the beginning rather than sequential monotherapy. 3, 1 This aggressive upfront approach is critical because prompt treatment reduces long-term morbidity and mortality 4.

Treatment Escalation Algorithm

When to Escalate

Add IVIG or PLEX if no clinical, radiological, or electrophysiological improvement occurs after initial corticosteroid treatment. 3, 1 The typical timeframe for assessing response is 2-4 weeks before escalating to second-line agents 2.

Second-Line Immunotherapy

Rituximab is the preferred second-line agent for antibody-mediated autoimmune encephalitis, chosen by 80% of experts even in cases with unknown antibodies 2. This preference reflects rituximab's mechanism of B-cell depletion, which is appropriate for antibody-mediated pathology 2.

Cyclophosphamide should be considered for cell-mediated autoimmunity rather than antibody-mediated disease 1, 2. Both agents have demonstrated good results as rescue therapy 2.

The evidence supporting second-line agents comes from retrospective observations showing that approximately half or more patients require escalation beyond first-line therapy 5. While controlled trial data remain limited, accumulated clinical experience supports their use 6, 5.

Bridging and Maintenance Therapy

After acute treatment, initiate bridging therapy with one of the following 3:

  • Gradual oral prednisone taper 3
  • Monthly IVIG 3
  • Monthly intravenous methylprednisolone 3

This maintenance approach helps prevent relapses, which occur in a significant proportion of patients 7.

Special Populations and Contexts

Immune Checkpoint Inhibitor-Related Encephalitis

Permanently discontinue the checkpoint inhibitor immediately in cases of ICI-related autoimmune encephalitis 1, 2. High-dose intravenous corticosteroids with ICI discontinuation is the standard approach for higher-grade neurologic immune-related adverse events 4. Additional immunosuppressive therapy with IVIG, plasmapheresis, rituximab, or cyclosporine may be required for rapidly progressive or steroid-refractory cases 4.

Refractory Cases

A minority of patients remain refractory to both first- and second-line therapies 6, 5. For these challenging cases, emerging options include cytokine-based drugs (tocilizumab, interleukin-2/basiliximab), plasma cell-depleting agents (bortezomib, daratumumab), and treatments targeting intrathecal immune cells (intrathecal methotrexate, natalizumab) 6. However, evidence for these agents is limited to case reports and small series 6.

Critical Pitfalls to Avoid

Do not delay immunotherapy while waiting for antibody test results 1. Commercial antibody panels often have prolonged turnaround times and are inherently limited given the ever-growing number of identified antibodies and likelihood of T-cell mediated pathogenesis in some cases 4. Treatment decisions must be made based on clinical presentation, with long-term management modified according to antibody results if identified 4.

Do not fail to screen for underlying malignancy, as this may miss paraneoplastic causes 1. Cancer screening with contrast-enhanced CT of chest, abdomen, and pelvis should be performed in relevant cases 1.

Recognize that median time to onset of neurologic symptoms is approximately 6 weeks, with median time to resolution around 8 weeks 4. This timeline helps set realistic expectations for treatment response.

Supportive Care Essentials

Beyond immunotherapy, comprehensive supportive management is essential 1:

  • Manage seizures with appropriate antiepileptic medications 1
  • Monitor and treat blood pressure and heart rate fluctuations in dysautonomia; consider temporary pacemaker for severe dysrhythmia 1
  • Implement fluid restriction for hyponatremia related to inappropriate antidiuretic hormone secretion 1
  • Monitor intracranial pressure in cases with massive inflammation and brain edema 1

References

Guideline

Autoimmune Encephalitis Treatment Guidelines

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Treatment of Autoimmune Encephalitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Treatment of Autoimmune Encephalitis with IVIG or PLEX

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Treatment strategies for autoimmune encephalitis.

Therapeutic advances in neurological disorders, 2018

Research

Immunotherapy in autoimmune encephalitis.

Current opinion in neurology, 2022

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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