What is the appropriate clinical application and protocol for Theta Burst Stimulation (TBS), including intermittent TBS (iTBS) and continuous TBS (cTBS), in patients with treatment-resistant depression or other conditions where Transcranial Magnetic Stimulation (TMS) is indicated?

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Last updated: February 1, 2026View editorial policy

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Theta Burst Stimulation Protocol for Treatment-Resistant Depression

Direct Recommendation

For treatment-resistant depression, use intermittent theta burst stimulation (iTBS) targeting the left dorsolateral prefrontal cortex (L-DLPFC) or bilateral sequential TBS (combining continuous TBS to right DLPFC with iTBS to left DLPFC), as these protocols demonstrate non-inferiority to standard 10 Hz rTMS while reducing treatment time from 37.5 minutes to 3 minutes per session. 1

However, the 2022 VA/DoD guidelines state there is insufficient evidence to make a recommendation for or against theta-burst stimulation, despite its demonstrated non-inferiority to standard rTMS. 2 This conservative guideline position conflicts with the robust clinical trial data showing TBS effectiveness.

Clinical Protocol Selection Algorithm

First-Line TBS Protocol

  • Use iTBS to L-DLPFC as the primary protocol, delivering 600 pulses per session at 120% resting motor threshold 1, 3
  • Treatment schedule: 5 sessions per week for 4-6 weeks 1
  • This protocol achieved response rates of 36-47% and remission rates of 26-34% in naturalistic studies 4

Enhanced Protocol for Severe Cases

  • Use bilateral sequential TBS: continuous TBS (cTBS) to right DLPFC (600 pulses) followed by iTBS to left DLPFC (600 pulses) 5, 4
  • Bilateral TBS demonstrated superior anxiolytic effects compared to unilateral stimulation 4
  • Bilateral protocols required fewer total treatments (27 vs 29 sessions on average) to achieve response 4
  • Meta-analysis confirms bilateral TBS (cTBS R-DLPFC + iTBS L-DLPFC) provides favorable risk-benefit balance 5

Accelerated Protocol Considerations

  • Accelerated protocols deliver multiple sessions per day (up to 5 sequential bilateral treatments daily for 5 days) 3
  • Response rates of 38% achieved within 2 weeks post-treatment with accelerated iTBS, with 30% achieving remission 6
  • Critical caveat: 60% of patients could not tolerate high-intensity accelerated stimulation in one study 3
  • Delayed clinical effects are common—response rates increase from 20% at day 5 to 32% at 2 weeks post-treatment 3

Patient Eligibility Criteria

Minimum Requirements

  • Failed at least 2 adequate antidepressant trials (minimum 4 weeks each at therapeutic dose, different mechanisms of action) 7
  • Trials must have occurred within current depressive episode 7
  • Baseline HDRS-17 score ≥18 1

Patients Who Should NOT Be Excluded

  • Multiple prior medication failures (even numerous augmentation strategies) 7
  • Previous ECT or TMS failure 7
  • Comorbid personality disorders or other mental health conditions (unless these clearly preceded and are independent of MDD) 7
  • High rates of comorbid PTSD or substance use disorders 2

Critical Eligibility Pitfall

  • Do not count medication trials discontinued before 4 weeks due to side effects as failed trials for establishing treatment-resistant depression 7

Treatment Parameters

Standard iTBS Protocol

  • Target: Left DLPFC
  • Intensity: 120% resting motor threshold 3
  • Pulses per session: 600 1, 3
  • Session duration: 3 minutes 1
  • Frequency: 5 days per week 1
  • Total duration: 4-6 weeks (20-30 sessions) 1, 4

Bilateral Sequential TBS Protocol

  • First: cTBS to right DLPFC (600 pulses)
  • Second: iTBS to left DLPFC (600 pulses)
  • Same intensity and frequency parameters as unilateral 4, 3

Expected Outcomes and Timeline

Response Rates

  • Unilateral iTBS: 36% response, 26% remission 4
  • Bilateral TBS: 47% response, 34% remission 4
  • Meta-analysis confirms iTBS (L-DLPFC) demonstrates higher response and remission rates compared to sham 5

Temporal Pattern of Response

  • Delayed clinical effects are common—assess response at 2 weeks post-treatment, not immediately after final session 3, 6
  • Response rates increase from 28% at end of treatment to 38% two weeks later 6
  • 69% of responders maintained response at 6 months without additional treatment or medication changes 4

Safety and Tolerability Profile

Common Adverse Events

  • Headache is most common (64-65% of patients) 1
  • Self-rated pain intensity slightly higher with iTBS compared to standard rTMS (3.8 vs 3.4 out of 10) 1
  • No significant differences in switch to mania or treatment site discomfort between TBS protocols and sham 5

Dropout Rates

  • Low discontinuation rates: 6-8% across protocols 1
  • No significant differences in all-cause discontinuation between TBS and sham 5

Cognitive Effects During Treatment

  • High-frequency stimulation (≥10 Hz) can temporarily disrupt memory precision during treatment 8
  • Effects are temporary and occur during the treatment period 8
  • Inform patients about possible transient memory difficulties during active treatment 8

Access and Practical Considerations

Treatment Burden

  • Standard TBS requires frequent onsite visits (5 sessions per week for 4-6 weeks) 9
  • Accelerated protocols reduce total treatment duration but require multiple daily sessions 3, 6
  • Only highly motivated patients should be recruited for intensive accelerated protocols 9

Advantages Over Standard rTMS

  • Treatment time reduced from 37.5 minutes to 3 minutes per session 1
  • Allows treatment of multiple patients per day with current rTMS devices 1
  • Non-inferior clinical effectiveness to standard 10 Hz rTMS 1

Maintenance Strategies

  • Some protocols incorporate maintenance interventions twice weekly for 3 months following acute treatment phase 9
  • Response duration: 3-6 months following standard acute treatment course 9
  • At least 4-6 weeks of daily treatment required to induce significant clinical improvement 9
  • Protocols with fewer than 4 weeks (3 weeks or less) showed no difference from sham treatment 9

Guideline-Evidence Discordance

Important clinical context: The 2022 VA/DoD guidelines state insufficient evidence for TBS 2, yet the THREE-D trial (2018) definitively established non-inferiority 1, and subsequent meta-analyses confirm favorable risk-benefit balance 5. This discordance reflects guideline lag rather than lack of evidence. The aggregate literature supports TBS as an effective, faster alternative to standard rTMS for treatment-resistant depression.

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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