In patients (adults or children) with suspected bacteremia, sepsis, endocarditis, or other systemic infection, which blood culture bottle should be drawn first: aerobic or anaerobic?

Medical Advisory BoardAll articles are reviewed for accuracy by our Medical Advisory Board
Educational purpose only • Exercise caution as content is pending human review
Article Review Status
Submitted
Under Review
Approved

Last updated: February 19, 2026View editorial policy

Personalize

Help us tailor your experience

Which best describes you? Your choice helps us use language that's most understandable for you.

Blood Culture Bottle Collection Order

When drawing blood cultures, inoculate the aerobic bottle first, followed by the anaerobic bottle. This practice minimizes the risk of introducing air into the anaerobic bottle and optimizes recovery of both aerobic and anaerobic organisms 1.

Rationale for Bottle Order

  • Drawing the aerobic bottle first prevents air contamination of the anaerobic bottle, which could compromise the recovery of obligate anaerobes 1.

  • The aerobic bottle should receive blood first because most clinically significant bloodstream pathogens are aerobic or facultative organisms, and any air introduced during collection will not affect their recovery 1.

  • After filling the aerobic bottle, the anaerobic bottle should be inoculated second to maintain optimal anaerobic conditions for organisms requiring reduced oxygen environments 1, 2.

Volume Distribution Strategy

  • Each bottle should receive 8-10 mL of blood for a total of 20 mL per blood culture set in adults 1.

  • When insufficient blood volume is available (less than 20 mL), inoculate only the aerobic bottle rather than splitting inadequate volumes between both bottles 1.

  • For pediatric patients weighing ≤12.7 kg with limited blood volumes (≤10 mL total), inoculate all blood into a single aerobic bottle rather than splitting between aerobic and anaerobic bottles 1, 3.

Clinical Importance of Including Both Bottle Types

  • Both aerobic and anaerobic bottles should be used routinely in adult blood culture sets because the anaerobic bottle significantly increases recovery of Staphylococcus aureus, anaerobes, and certain Enterobacteriaceae 2, 4.

  • Studies demonstrate that using one aerobic plus one anaerobic bottle yields significantly more pathogens than using two aerobic bottles (P < 0.001 for organisms requiring single positive set, P = 0.04 for conditional pathogens) 4.

  • The anaerobic bottle alone detects 15-18% of positive blood cultures that would be missed if only aerobic bottles were used 5.

  • Obligate anaerobes are recovered significantly more frequently from anaerobic bottles (P = 0.03), though they now represent fewer than 5% of all blood culture isolates 1, 6.

Special Circumstances Favoring Aerobic-Only Strategy

  • When fungemia due to yeast is strongly suspected, consider splitting blood between two aerobic bottles instead of the standard aerobic-anaerobic pair, as yeasts are highly aerobic organisms 1, 7.

  • For patients with suspected Candida bloodstream infection, using two aerobic bottles or specialized fungal media (such as MycoF/Lytic) may optimize recovery 1.

Common Pitfalls to Avoid

  • Never inoculate the anaerobic bottle first, as this increases the risk of introducing air during the collection process, which compromises anaerobic organism recovery 1.

  • Avoid underfilling bottles—inadequate blood volume is the most common reason for false-negative blood cultures, as bacteremia concentration is often less than 1 organism per milliliter 1, 7.

  • Do not assume anaerobic bottles are unnecessary based solely on low anaerobic bacteremia rates; the anaerobic bottle enhances recovery of facultative organisms like S. aureus beyond just obligate anaerobes 2, 4.

  • Ensure proper skin antisepsis with 2% chlorhexidine in 70% alcohol or iodine-containing solution applied twice, allowing 30 seconds drying time to minimize contamination rates below 3% 1, 7.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Optimización de Hemocultivos Pediátricos

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Research

Evaluation of the routine use of the anaerobic bottle when using the BACTEC blood culture system.

Journal of microbiology, immunology, and infection = Wei mian yu gan ran za zhi, 2007

Guideline

Minimum Blood Volume Requirements for Diagnostic Tests

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

Have a follow-up question?

Our Medical A.I. is used by practicing medical doctors at top research institutions around the world. Ask any follow up question and get world-class guideline-backed answers instantly.