Laboratory Tests for Infectious Non-Bloody Diarrhea
For a patient with huge infectious non-bloody diarrhea, the optimal diagnostic specimen is a diarrheal stool sample that takes the shape of the container, which should be submitted for routine stool culture and molecular testing. 1
Primary Diagnostic Tests
First-Line Testing
Stool Culture: For detection of bacterial pathogens including:
- Salmonella species
- Shigella species
- Campylobacter species
- E. coli O157:H7 or other Shiga toxin-producing E. coli 1
Molecular Testing: Nucleic acid amplification tests (NAATs) for detection of:
- Bacterial pathogens (more sensitive than culture)
- Viral pathogens (norovirus, rotavirus, adenovirus)
- Parasitic organisms 1
Additional Testing Based on Clinical Scenario
Clostridium difficile testing: Consider in patients with:
- History of antibiotic use
- Healthcare-associated diarrhea
- Persistent diarrhea without identified etiology 1
Parasite Testing:
- Ova and parasite examination including permanent stained smears
- Specific immunoassays for Giardia lamblia, Cryptosporidium, and Entamoeba histolytica 1
Specimen Collection Guidelines
- Optimal specimen: Fresh diarrheal stool that takes the shape of the container 1
- Alternative: If timely diarrheal stool cannot be collected, a rectal swab may be used for bacterial detection (though less optimal) 1
- Timing: Collect specimen before antimicrobial administration when possible 2
- Volume: Submit sufficient quantity for complete testing (follow laboratory guidelines)
Testing Algorithm
Initial evaluation:
- Submit fresh stool for routine enteric pathogen culture AND molecular testing (NAAT)
- Consider multiplex PCR panels that detect multiple bacterial, viral, and parasitic pathogens simultaneously
If high-risk exposures or specific clinical features present:
- Travel history → Add specific testing for enterotoxigenic E. coli, Vibrio, etc.
- Immunocompromised status → Add testing for opportunistic pathogens
- Persistent symptoms → Consider parasitic causes and C. difficile
For negative initial testing with ongoing symptoms:
- Consider additional specialized testing for less common pathogens
- Reevaluate for non-infectious causes 1
Important Considerations
Do not use fecal leukocyte examination or stool lactoferrin detection to establish the cause of infectious diarrhea (strong recommendation) 1
Do not use serologic tests to establish an etiology of infectious diarrhea (strong recommendation) 1
Molecular techniques are generally more sensitive than culture-based methods and less dependent on specimen quality 1
For viral and protozoal agents, and C. difficile toxin detection, fresh stool is strongly preferred over rectal swabs 1
Common Pitfalls to Avoid
- Inadequate specimen collection: Ensure proper collection of diarrheal (not formed) stool
- Delayed transport: Specimens should be transported promptly to the laboratory
- Premature cessation of testing: If initial tests are negative but symptoms persist, consider expanded testing
- Overreliance on single test modality: Combined approaches (culture plus molecular) yield higher detection rates
- Failure to consider C. difficile: Particularly in patients with recent antibiotic exposure or healthcare contact
By following this systematic approach to laboratory testing, clinicians can optimize the detection of infectious causes of non-bloody diarrhea, leading to appropriate treatment and improved patient outcomes.