What is the recommended management for a patient with suspected encephalitis?

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Management of Suspected Encephalitis

Immediate Empirical Treatment

Start intravenous acyclovir (10 mg/kg every 8 hours) immediately in all patients with suspected encephalitis, as soon as possible after presentation, without waiting for diagnostic confirmation. 1 This recommendation is based on randomized controlled trials demonstrating that acyclovir reduces mortality in HSV encephalitis from >70% to 20-30%, with outcomes dramatically better when treatment begins within 48 hours of hospital admission. 1

Dosing Specifications

  • Adults and children with normal renal function: 10 mg/kg IV every 8 hours 1
  • Neonates: 20 mg/kg IV every 8 hours 1
  • Adjust dose in renal impairment 1, 2
  • Duration: 14-21 days for confirmed HSV encephalitis 1
  • Immunocompromised patients: Treat for at least 21 days, then reassess with CSF PCR 1

Critical Timing Considerations

The 6-hour window is crucial: if CSF results or imaging will not be available within 6 hours of admission, or if the patient is severely ill or deteriorating, start acyclovir immediately. 1 Mortality drops to 8% when acyclovir is initiated within 4 days of symptom onset, compared to 28% overall mortality at 18 months. 1

Additional Empirical Antimicrobials

  • Add antibiotics for bacterial meningitis if clinically indicated (altered mental status with fever, meningismus, or CSF pleocytosis suggesting bacterial infection) 1
  • Add doxycycline if rickettsial or ehrlichial infection suspected based on season, tick exposure, or rash 1

Urgent Diagnostic Workup (Parallel to Treatment)

Lumbar Puncture - Perform Immediately Unless Contraindicated

Obtain CSF as soon as possible after hospital admission 1, 3, but delay only if: 1

  • Signs of raised intracranial pressure (papilledema, focal neurological deficits suggesting mass effect)
  • Coagulopathy
  • Significant brain shift on imaging

CSF studies required: 1

  • Cell count with differential
  • Protein and glucose
  • HSV-1 and HSV-2 PCR (results should be available within 24-48 hours) 1, 3
  • VZV PCR 1
  • Enterovirus PCR 1
  • Bacterial culture and Gram stain
  • Consider: West Nile virus PCR, arbovirus serology based on epidemiology 1

Neuroimaging - Within 24 Hours

MRI brain is strongly preferred over CT (detects early changes in 90% of HSV encephalitis cases versus only 25% for CT) 4, 3. Perform under general anesthesia if needed for patient cooperation. 3

EEG - Within 24 Hours

Obtain EEG to assess for seizure activity and characteristic patterns (temporal lobe abnormalities in HSV encephalitis). 1, 3

Autoimmune Encephalitis Evaluation

Send autoimmune antibody panel from both serum and CSF simultaneously with infectious workup: 3

  • NMDA receptor antibodies
  • Voltage-gated potassium channel complex antibodies
  • LGI1, CASPR2, IGLON5 antibodies
  • Other neuronal surface and intracellular antibodies 3

Do not delay empirical acyclovir while awaiting autoimmune results, as HSV and autoimmune encephalitis can have overlapping presentations. 3

Critical Care Management

ICU Assessment Required for:

  • Declining level of consciousness 1, 4, 3
  • Glasgow Coma Score <6 1
  • Respiratory compromise
  • Hemodynamic instability

ICU Interventions: 1, 4, 3

  • Airway protection and ventilatory support
  • Management of raised intracranial pressure and optimization of cerebral perfusion pressure
  • Correction of electrolyte imbalances (particularly hyponatremia, which is common) 5
  • Seizure management: Use IV levetiracetam (30-60 mg/kg/day) or IV valproate (20-30 mg/kg loading dose); avoid phenytoin as first-line 4

Transfer to Neuroscience Center

Transfer within 24 hours if: 1, 3

  • Diagnosis not rapidly established
  • Patient fails to improve with initial therapy
  • Need for neurosurgical consultation

Etiology-Specific Treatment Adjustments

If HSV PCR Returns Negative but Clinical Suspicion Remains High

Repeat CSF PCR 3-7 days later on a second specimen, as initial PCR can be falsely negative if performed very early. 1 Continue acyclovir until repeat testing completed. 1

If Autoimmune Encephalitis Confirmed or Strongly Suspected

Initiate first-line immunotherapy immediately after excluding active infection: 3

  • High-dose IV methylprednisolone 1g daily for 3-5 days 4, 3
  • Plus IVIG 0.4 g/kg/day for 5 days 4, 3
  • Continue immunosuppression with gradual oral prednisone taper or monthly IVIG to prevent relapse 3

For Paraneoplastic Encephalitis

Search for occult malignancy with CT or PET scan of chest, abdomen, and pelvis. 4 Treat underlying tumor when identified. 4

For Returning Travelers

  • Test for malaria with rapid antigen tests and three thick/thin blood films if returning from endemic areas 1
  • Consider cerebral malaria treatment if high suspicion and delay in film results 1
  • Evaluate for Japanese encephalitis, dengue, or other geographically relevant pathogens 1

Common Pitfalls to Avoid

  1. Do not wait for LP or imaging results to start acyclovir if there will be any delay beyond 6 hours or if patient is deteriorating 1, 3

  2. Do not rely on negative CSF PCR to exclude HSV encephalitis if performed very early; repeat testing may be needed 1

  3. Do not use CT brain alone - MRI is far superior for detecting early encephalitic changes 4, 3

  4. Do not delay immunotherapy while awaiting antibody results if autoimmune encephalitis is suspected and infection has been reasonably excluded 3

  5. Predictors of poor outcome include: age >30 years, Glasgow Coma Score <6, and delay >4 days before starting acyclovir 1 - emphasizing the critical importance of early treatment

Brain Biopsy - Reserved for Specific Situations

Consider stereotactic brain biopsy only if: 1

  • Patient is HSV PCR-negative and deteriorates despite acyclovir
  • Focal lesion on imaging suggests alternative diagnosis
  • No diagnosis established after comprehensive workup

Modern stereotactic approaches have low complication rates, and biopsy identifies alternative treatable diagnoses in 20% of suspected HSV cases. 1

Discharge Planning and Rehabilitation

Never discharge patients without: 1, 3

  • Definitive or suspected diagnosis established
  • Outpatient follow-up appointment scheduled (at least one) 1, 5, 3
  • Comprehensive rehabilitation assessment arranged 1, 5, 4, 3

All patients require access to: 1, 5, 4, 3

  • Neuropsychology evaluation (30-50% develop long-term cognitive deficits) 4
  • Neuropsychiatry assessment (anxiety, depression, obsessive behaviors common) 1, 4
  • Speech and language therapy
  • Neurophysiotherapy
  • Occupational therapy

Sequelae may not be immediately apparent at discharge - structured follow-up is essential to identify delayed neurological and psychiatric complications. 1, 5, 4

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Guideline

Treatment of Suspected Neuroimmune Encephalitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

Treatment of Paraneoplastic Encephalitis

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2026

Guideline

Treatment Protocol for Wernicke's Encephalopathy

Praxis Medical Insights: Practical Summaries of Clinical Guidelines, 2025

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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