What is the procedure for performing a cerebrospinal fluid (CSF) test for Herpes Simplex Virus type 1 (HSV-1) Encephalitis?

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From the Guidelines

A CSF test for HSV-1 encephalitis is performed through a lumbar puncture (spinal tap) procedure, where a healthcare provider inserts a thin needle between two vertebrae in the lower back to collect cerebrospinal fluid, and the lab will perform a polymerase chain reaction (PCR) test on the CSF sample to detect HSV-1 DNA, which is the gold standard diagnostic test with over 95% sensitivity and specificity 1.

Procedure Details

The procedure involves the patient lying on their side in a curled position or sitting leaning forward to widen the spaces between vertebrae. After cleaning and numbing the area, the doctor inserts the needle, collects about 1-2 teaspoons of CSF, and sends it to the laboratory for analysis.

Key Considerations

  • The CSF may also show other abnormalities such as elevated white blood cells (pleocytosis), elevated protein levels, and normal glucose levels 1.
  • Patients should remain lying down for a few hours after the procedure to prevent post-lumbar puncture headaches.
  • The procedure takes about 30 minutes, and results are typically available within 24-48 hours, allowing for prompt initiation of antiviral therapy if HSV encephalitis is confirmed.

Diagnostic Approach

  • If the initial CSF PCR is negative, but HSV encephalitis is still suspected, the test may be repeated after 24-48 hours to determine whether it is still negative for HSV by PCR 1.
  • A negative HSV PCR result early in the disease process coupled with a negative HSV-specific CSF antibody study sampled 10-14 days after symptom onset effectively rules out the disease 1.

From the Research

Procedure for Performing a Cerebrospinal Fluid (CSF) Test for Herpes Simplex Virus Type 1 (HSV-1) Encephalitis

The procedure for performing a CSF test for HSV-1 encephalitis involves several steps:

  • Lumbar puncture: A lumbar puncture is performed to collect a CSF sample from the patient 2, 3, 4.
  • Polymerase Chain Reaction (PCR) testing: The CSF sample is then tested for HSV-1 DNA using PCR, which is considered the diagnostic gold standard for HSV-1 encephalitis 2, 3, 5, 4, 6.
  • Interpretation of results: The results of the PCR test are interpreted, and a positive result confirms the diagnosis of HSV-1 encephalitis 2, 3, 5, 4, 6.
  • Repeat testing: If the initial PCR test is negative, but there is still a high clinical suspicion of HSV-1 encephalitis, repeat testing may be performed within 3 to 7 days 2.

Considerations for CSF Testing

  • Timing of sample collection: The timing of CSF sample collection is important, as the sensitivity of PCR testing may decrease over time 6.
  • Use of alternative testing methods: Alternative testing methods, such as the BioFire CSF FilmArray Meningitis/Encephalitis Panel, may be used to detect HSV-1 DNA in CSF samples 5.
  • Clinical correlation: The results of CSF testing should be correlated with clinical findings and other diagnostic tests to confirm the diagnosis of HSV-1 encephalitis 2, 3, 4.

References

Guideline

Guideline Directed Topic Overview

Dr.Oracle Medical Advisory Board & Editors, 2025

Research

Viral encephalitis.

Journal of neurology, 2005

Research

Virological diagnosis of herpes simplex encephalitis.

Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, 2000

Professional Medical Disclaimer

This information is intended for healthcare professionals. Any medical decision-making should rely on clinical judgment and independently verified information. The content provided herein does not replace professional discretion and should be considered supplementary to established clinical guidelines. Healthcare providers should verify all information against primary literature and current practice standards before application in patient care. Dr.Oracle assumes no liability for clinical decisions based on this content.

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